EST details — SGN-E291113
| Search information |
| Request: 291113 | Match: SGN-E291113 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C88635 | Clone name: cLET-8-O16 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190783 [TUS-61-E21] | Trace: SGN-T341703 | EST: SGN-E540828 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E291113 | Length: 419 bp (631 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E291113 [] (trimmed)
ATCATCAGTAGAGCTTGCATTGAACATGCAATCCACTGATCTCTCTGAATGTCTTTCTGGGATTTCACATGATGACGTGACGAAGCAAGATGCCT
CGGTTTGGTACTAGCAATGCGATTACTCAAATGAACATCAAGCAGTGGATATCACAATATACCTTTAATCAGGTGGATTTCAGTTTGCCTATAGT
TCTCAGTTTGGGTTTTCTGTTACCATGTAGTTGTAGAGGTTGGAGGATCGTGCATGACGTTATTACAAGGGAGTAGTAAGAGATGTCATGCTGCT
GGTTAGAAGGAACTTATAGATGTTTCTAAATAAGGTTTAGCAGTCAGTTTATTTTCATATATGTCTATAACTCTATATAGGTTTTAGCTTTATCC
CATAGTCAATCGTTGGTTTCGGAGATATTTAAACGCTTT
CGGTTTGGTACTAGCAATGCGATTACTCAAATGAACATCAAGCAGTGGATATCACAATATACCTTTAATCAGGTGGATTTCAGTTTGCCTATAGT
TCTCAGTTTGGGTTTTCTGTTACCATGTAGTTGTAGAGGTTGGAGGATCGTGCATGACGTTATTACAAGGGAGTAGTAAGAGATGTCATGCTGCT
GGTTAGAAGGAACTTATAGATGTTTCTAAATAAGGTTTAGCAGTCAGTTTATTTTCATATATGTCTATAACTCTATATAGGTTTTAGCTTTATCC
CATAGTCAATCGTTGGTTTCGGAGATATTTAAACGCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E291113] | SGN-U585765 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104509 [Download][View] | Facility Assigned ID: TMEBD92TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0164 | Quality Trim Threshold: 14.5 |


