EST details — SGN-E288950
| Search information |
| Request: 288950 | Match: SGN-E288950 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76297 | Clone name: cLES-17-I8 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190577 [TUS-60-M7] | Trace: SGN-T341346 | EST: SGN-E540471 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190577 [TUS-60-M7] | Trace: SGN-T341349 | EST: SGN-E540474 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E288950 | Length: 578 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288950 [] (trimmed)
GTAATCATATATCCATGGCGGTTTTGAGCTGCCAAACATACTTTATCAATTCTAAAAAAATTATAAAGACAAAGCCGTTCATCTGTTGCTCATCA
TCTCAAAACAACAATGTGAAGGTAATCATAAATGGAGCTGCTAAGGAAATTGGCAGAGCTGCCGTTATTGCTGTCACTAAAGCTAGAGGAATGGA
ATTGGCTGGAGCTGTTGATTCTAATTTTGTTGGACAAGATATTGGGCAGGTTTGTGACATGGAAGAGCCTCTAGAAATACCAATAATTAACGACC
TTACCATGGTCTTGGGTTCAATATCCCAGTTAAAAGCAACGGGAGTAGTCATTGATTTCACTGACCCTTCTACAGTTTACGACAATGTCAAACAG
GCAACAGCATTTGGGATGAATAGTGTTGTTTACGTTCCCAGAATTAAGCAGGAAACTGTCATGGCTTTATCTATGTTATGCGACAAGGCCAGCAC
GGGTTGTTTGGTTGCACCAACTCTTTCAATTGGATCCATACTTCTTCAACAAGCAGCAATTTCAGCTTCTTTTCACTACAACAATGTTGAAATTG
TTGAGTCT
TCTCAAAACAACAATGTGAAGGTAATCATAAATGGAGCTGCTAAGGAAATTGGCAGAGCTGCCGTTATTGCTGTCACTAAAGCTAGAGGAATGGA
ATTGGCTGGAGCTGTTGATTCTAATTTTGTTGGACAAGATATTGGGCAGGTTTGTGACATGGAAGAGCCTCTAGAAATACCAATAATTAACGACC
TTACCATGGTCTTGGGTTCAATATCCCAGTTAAAAGCAACGGGAGTAGTCATTGATTTCACTGACCCTTCTACAGTTTACGACAATGTCAAACAG
GCAACAGCATTTGGGATGAATAGTGTTGTTTACGTTCCCAGAATTAAGCAGGAAACTGTCATGGCTTTATCTATGTTATGCGACAAGGCCAGCAC
GGGTTGTTTGGTTGCACCAACTCTTTCAATTGGATCCATACTTCTTCAACAAGCAGCAATTTCAGCTTCTTTTCACTACAACAATGTTGAAATTG
TTGAGTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E288950] | SGN-U578917 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101392 [Download][View] | Facility Assigned ID: TPSCN52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
