EST details — SGN-E279751
| Search information |
| Request: 279751 | Match: SGN-E279751 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73757 | Clone name: cLER-5-P18 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189751 [TUS-58-J21] | Trace: SGN-T349032 | EST: SGN-E548157 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E279751 | Length: 271 bp (668 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279751 [] (trimmed)
CAGGCAACATCAATTGTCGGTGTAGCTATTGCTTTTGAAGCGAGCCGGCAGCTGGCACTTATCATTCTTGTTATGATTCCTCTAATCGGATTAAA
TGGATATATCCAAATCAAGTTCATGAAAGGGTTCACTGCAAATGCAAAGGTGATGTATGAGGAAGCAAGTCAAGTTGCCAATGATGCTGTTGGAG
GTATAAGAACTGTTGCCTCATTTTGTGCCGAAGAGAACGTGATGGTAATCTACAAATGAAAGTGTGAAGGCCCATTGAAGG
TGGATATATCCAAATCAAGTTCATGAAAGGGTTCACTGCAAATGCAAAGGTGATGTATGAGGAAGCAAGTCAAGTTGCCAATGATGCTGTTGGAG
GTATAAGAACTGTTGCCTCATTTTGTGCCGAAGAGAACGTGATGGTAATCTACAAATGAAAGTGTGAAGGCCCATTGAAGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279751] | SGN-U601700 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93260 [Download][View] | Facility Assigned ID: TPRAT93TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0335 | Quality Trim Threshold: 14.5 |
Working
