EST details — SGN-E279456
| Search information |
| Request: 279456 | Match: SGN-E279456 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69576 | Clone name: cLER-11-L16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189840 [TUS-58-N14] | Trace: SGN-T340080 | EST: SGN-E539205 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189840 [TUS-58-N14] | Trace: SGN-T340083 | EST: SGN-E539208 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E279456 | Length: 564 bp (962 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279456 [] (trimmed)
CTCAGTCTATGAGAAGCTGGGCAAAATTTCCGGGGAATCAGCCTTGAGAGATTATCTGTCTACTCATCCTTCTGGGAAGAAGAGAGCGCAGTTGT
TGGCTCAGGCTAAAGTAATGGATGAAGCCCTTACAATATATAGGGAAGTGCAGGCAGGAAAAGGGATTGAGGGTTTCCTATAGAGGAAAGGATGA
AATGCACAGGCCATGTGAGAGTAGGGAGCCGCCCAGAAGCCAGTTTTTTCGGAAGTTATGCTCATCTTTTCTTCGCATTTTGATTGATTTTCGTT
TCAAGTTCCAGTAAGTGAAGATTAAGCAAAGAATTCTTCACAAAATTGTTGTTTTTGGACAACTCCAATTCCCTTTCCTGGCTGCTGAAATTGAC
TGTTCAATAAGCATACTTATCTGTCTGTTGTAACCCTTTCAAATCCCGTGCCGGGAAGTTCCTACGGAATCCAGTAAGCAACTTGTAAAGCAACA
TTCCATCTTTTTAGGTAAAATTGTGTTGTCGATCAGCTACCAAAATCTGTCATTTGATTATATTTCCTTTTAGCAATGTGCAATCCATC
TGGCTCAGGCTAAAGTAATGGATGAAGCCCTTACAATATATAGGGAAGTGCAGGCAGGAAAAGGGATTGAGGGTTTCCTATAGAGGAAAGGATGA
AATGCACAGGCCATGTGAGAGTAGGGAGCCGCCCAGAAGCCAGTTTTTTCGGAAGTTATGCTCATCTTTTCTTCGCATTTTGATTGATTTTCGTT
TCAAGTTCCAGTAAGTGAAGATTAAGCAAAGAATTCTTCACAAAATTGTTGTTTTTGGACAACTCCAATTCCCTTTCCTGGCTGCTGAAATTGAC
TGTTCAATAAGCATACTTATCTGTCTGTTGTAACCCTTTCAAATCCCGTGCCGGGAAGTTCCTACGGAATCCAGTAAGCAACTTGTAAAGCAACA
TTCCATCTTTTTAGGTAAAATTGTGTTGTCGATCAGCTACCAAAATCTGTCATTTGATTATATTTCCTTTTAGCAATGTGCAATCCATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279456] | SGN-U571558 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94208 [Download][View] | Facility Assigned ID: TPRBR68THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 12.5 |
Working
