EST details — SGN-E265522
| Search information |
| Request: 265522 | Match: SGN-E265522 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C47075 | Clone name: cLEI-14-O22 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189169 [TUS-57-B15] | Trace: SGN-T339000 | EST: SGN-E538125 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189169 [TUS-57-B15] | Trace: SGN-T339002 | EST: SGN-E538127 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E265522 | Length: 230 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E265522 [] (trimmed)
TGGAGTTCAACCGCCTGATTCAGATTTAGCACTAAGGCGTGGGACTCCGAATTACATGGCTACGGAACAGTGGGAACCTGAGGTTAGAGGCCCAA
TAACTTGTGAGACTGATGCTAGCGGATTCGGATGCAACGTTATCTAGATGTTGACTGGTGTTCAGTCCTGGATCGGAAAATCAGTCTATGATATC
TACCGCTTGGTGGTGATCAACCAAGACAAGCTATAACTTC
TAACTTGTGAGACTGATGCTAGCGGATTCGGATGCAACGTTATCTAGATGTTGACTGGTGTTCAGTCCTGGATCGGAAAATCAGTCTATGATATC
TACCGCTTGGTGGTGATCAACCAAGACAAGCTATAACTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E265522] | SGN-U585013 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82732 [Download][View] | Facility Assigned ID: TGSCB95TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0249 | Quality Trim Threshold: 14.5 |
Working
