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EST details — SGN-E242846

Search information 
Request: 242846Match: SGN-E242846
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C21117Clone name: cLED-31-L14
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169534 [TUS-5-P12] Trace: SGN-T351268 EST: SGN-E550393 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E242846Length: 520 bp (846 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E242846 [] (trimmed) GAAATTGCCAAATTAGGGTTTCTCTTGGTTCAATTATACGGAGCTTACGGTGAATTTTTGCAAACCCTAAGCCCTAAATTTCGATTATTTTGATT
CAGGAGAATCTTCAATTGGAAAACAGACGAGCTTCGTTCTTCAATTGGATTGGATACTCATCAGTTTGATCGAGTAAGCTATTTTTTCGTAGTTG
GAGATTTGAATTCTCTATGTACTGATGTTAGATTGTGAAAGGGATCACGTAGTCATTAACTCCAAAGATCAATGTGTTTCGTCATTGATATTCAG
ATATATTGAAATTATGAAGCTCAAATTGTAATCNAATCAGCTTTTAATAAAAAAAATTTCTCTATTGTAAGTTGAGGTCAGGTCAACTCAGCTTA
TTTCTCCAACAGAAAGAGGTAAGTTGAGGAAATAATGCTCTATTTATATACTTGGTGCTGATTGATGGATCCAGATAGCAAGAATTTTGGAAGAG
GGCCAAGAGAACTCACAGGTGCTCGCGATCTTATTAGTCACTTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E242846] SGN-U596290 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T56765 [Download][View] Facility Assigned ID: TOVET67TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0110 Quality Trim Threshold: 14.5