Notice: the solgenomics has been unstable, we apologize for the inconvenience.

EST details — SGN-E240120

Search information 
Request: 240120Match: SGN-E240120
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C21303Clone name: cLED-32-M24
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E240120Length: 560 bp (844 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E240120 [] (trimmed) CCGTGCTGCATGATTTCGCGCCAGACACATCATGAGAGGCTGAAATGAATATATTATCGCTGTCAGCCTATTATTGCAGCGAGTTTTTTCCTTCT
TTGATGATTCCGATTATCTCCCACTAATCCATTTCCCCGATTCAACCAATCCCAAACCTTACGGGAAATAGTTGTGTCTTGATTGATTCATGACT
AACTCTTTTAGGAAGAAGTATGAAGTCTTTTTTCCCCCTCTATTTTATTATGTTTTTCAATACTATCCTCAGCCAAAAGCAACAATAACAATTAC
GCCTCAATCCGAAACAGGTATTTTCAACCAAGATACACGATTTAAACTTGTTTATGACATGCTGTCCAACTGTGAAATGCTTCATAGAGAGCGGT
GGCGGAAAACATGTACATGTGATATAATTTGTTGAGGTTACACTCCCATCACAGTGCTACTGTAATCCATATATATTGTTGGCGGCTATCCCGTG
AAGTTTAGAACTTCTTGCTCTTCAGGTTTCTTTTTTCACTTTCTTACCTTTCTCATGTCATGGACAACGTAGTTCAAATGTCGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240120] SGN-U588741 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T57126 [Download][View] Facility Assigned ID: TOVEV84TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0124 Quality Trim Threshold: 14.5