EST details — SGN-C88343
| Search information |
| Request: 88343 | Match: SGN-C88343 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C88343 | Clone name: cLET-7-N8 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182007 is on microarray TOM1: SGN-S1-1-4.4.10.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182007 [TUS-38-H5] | Trace: SGN-T194703 | EST: SGN-E393377 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E291904 | Length: 280 bp (580 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E291904 [] (trimmed)
CCCCCGGCTGAGGTTTTTAACATTATATCTAAAATATGTTTTAAATTTATCAACATTGCTTTTCTTATTTCAATACTAATGAGTATCCAATTACT
AGCCTCAGCTGGTAATTTCTATAGAGATGTAGACATAACTTGGGGCGAAGGACGCGGTAAAATACAAGAAGGCGGTAGAGGCCTTGCCCTATCGC
TTGATAAACTTTCTGGCTCTGGCTTTCAATCCAAAAATGAGTACCTTTTTGGAAGATTCGATATGCAACTTAAACTCGTCCCTAAAAACT
AGCCTCAGCTGGTAATTTCTATAGAGATGTAGACATAACTTGGGGCGAAGGACGCGGTAAAATACAAGAAGGCGGTAGAGGCCTTGCCCTATCGC
TTGATAAACTTTCTGGCTCTGGCTTTCAATCCAAAAATGAGTACCTTTTTGGAAGATTCGATATGCAACTTAAACTCGTCCCTAAAAACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E291904] | SGN-U577928 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104157 [Download][View] | Facility Assigned ID: TMEBB76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 20.5 |
Working
