EST details — SGN-C88215
| Search information |
| Request: 88215 | Match: SGN-C88215 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C88215 | Clone name: cLET-7-G24 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184641 is on microarray TOM1: SGN-S1-1-2.1.14.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184641 [TUS-45-E23] | Trace: SGN-T198561 | EST: SGN-E397235 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E291962 | Length: 660 bp (862 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E291962 [] (trimmed)
ATAACTATCAAACAATTTCTTCTTCATCTCTAACAAAAAGATCAATATCCTTGAAATCATCGAAACAACAAACCAATCAAAACAAGAAAATCAAA
TCCAGTACTGAAAAAACCAAGAAAATGGACGATTCAAAACACCCAATTTACCACGGTGTTCGAAAACGAAGCTGGGGAAAATGGGTGTCTGAAAT
TCGCGAGCCGAGGAAAAAATCAAGGATTTGGCTTGGTACATTTTCTACAGCTGAAATGGCTGCCAGAGCACATGATGTAGCTGCAATTGCCATTA
AAGGTCACTTAGCTTTACTCAATTTCCCTGAATTAGCTCATCAATTTCCTATACCATCTTCGAAATGCGCTAAAGATATTCAATCTGCAGCCGCA
AAGGCTGCAGCTTTGAATATTTCACCAAGAAATTTTATGGAAAAACAGAGTACAGATGAGTTAATGGAAATGCCCTGTTCTTCTGAAGAAACAGA
GTCAGCAGAATCATCTTTGACGAGTAATAGCGAAGACCCTTTTCTTGATTTGCCTGATCTTCTTATGGATCTCACTCAAAAATTTGATAAATTCT
GTTACTATAATTCACCGTGGGATTTGGCTGGAGCTGTAAGCTTTTGGCCTCAAGAAGAGCTCTATTCGTGGGATTACAACCATGAAACTG
TCCAGTACTGAAAAAACCAAGAAAATGGACGATTCAAAACACCCAATTTACCACGGTGTTCGAAAACGAAGCTGGGGAAAATGGGTGTCTGAAAT
TCGCGAGCCGAGGAAAAAATCAAGGATTTGGCTTGGTACATTTTCTACAGCTGAAATGGCTGCCAGAGCACATGATGTAGCTGCAATTGCCATTA
AAGGTCACTTAGCTTTACTCAATTTCCCTGAATTAGCTCATCAATTTCCTATACCATCTTCGAAATGCGCTAAAGATATTCAATCTGCAGCCGCA
AAGGCTGCAGCTTTGAATATTTCACCAAGAAATTTTATGGAAAAACAGAGTACAGATGAGTTAATGGAAATGCCCTGTTCTTCTGAAGAAACAGA
GTCAGCAGAATCATCTTTGACGAGTAATAGCGAAGACCCTTTTCTTGATTTGCCTGATCTTCTTATGGATCTCACTCAAAAATTTGATAAATTCT
GTTACTATAATTCACCGTGGGATTTGGCTGGAGCTGTAAGCTTTTGGCCTCAAGAAGAGCTCTATTCGTGGGATTACAACCATGAAACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E291962] | SGN-U568489 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104215 [Download][View] | Facility Assigned ID: TMEAZ48TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 14.5 |
Working
