EST details — SGN-C87575
| Search information |
| Request: 87575 | Match: SGN-C87575 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C87575 | Clone name: cLET-5-D10 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181963 is on microarray TOM1: SGN-S1-1-8.2.10.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E290278 | Length: 326 bp (631 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E290278 [] (trimmed)
GCAACTGTCTGGACAAATCGTTCCTCGATGCAGGCTACGTGAGCTCCAGGAAAGTGAATGCAATTGGAGCACTTGAACTGAGGATTGTGAAGAGG
GGAACCTTTCATAAGATATTGGATCATTTCGTTGGATTAGGAGGCGCGGTGAGCCAGTTCAAAACCCCTAGATGTGTTGGTCCAAAAAAACAGCT
CATTGATCCAAATACTGTCTAGTAATGTTGTTAAGAGCTATTCCAGTACTGCTTTCTGTTAAATTTATATATGTATCTTTCCATATTTGTAACCC
TGCTGGCCATTCTTATCTTAATATATAATAGTGTAACAAAA
GGAACCTTTCATAAGATATTGGATCATTTCGTTGGATTAGGAGGCGCGGTGAGCCAGTTCAAAACCCCTAGATGTGTTGGTCCAAAAAAACAGCT
CATTGATCCAAATACTGTCTAGTAATGTTGTTAAGAGCTATTCCAGTACTGCTTTCTGTTAAATTTATATATGTATCTTTCCATATTTGTAACCC
TGCTGGCCATTCTTATCTTAATATATAATAGTGTAACAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290278] | SGN-U583984 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103726 [Download][View] | Facility Assigned ID: TMEAT17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0007 | Quality Trim Threshold: 12.5 |
Working
