EST details — SGN-C86087
| Search information |
| Request: 86087 | Match: SGN-C86087 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C86087 | Clone name: cLET-41-P11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185044 is on microarray TOM1: SGN-S1-1-7.2.11.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185044 [TUS-46-F18] | Trace: SGN-T192002 | EST: SGN-E390676 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185044 [TUS-46-F18] | Trace: SGN-T192256 | EST: SGN-E390930 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E298375 | Length: 579 bp (853 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E298375 [] (trimmed)
GCCACTTGTCTTCGAAAAGATTGGAATTTTCCCTTCAATTTACACAAGTTCTTTGAGATTCTCCACCAAACTGAGCTCGATTCCAGTGGCTATGG
CGTCTTCACTATTTTTTTCAACTCCAATTCCAACCAAACTAATCTCAAAGCAAAAACCCTTTTCTCATCACTCTTCAAATCCTCTTTTGCCCCAA
TCAACAATCAAACCCTTGAGGAGTTTGGTGGTTTCTTCTGCAGCTGCAATTGAAGCTGAAACAGAAACATCTAGCTCGAATTCCACTCCGTTGAA
GTCTCTTCCTTTTAGAGTCGGCCATGGATTTGACCTTCATCGATTGGAACCTGGTTATCCTTTGATTATTGGTGGGATTAATATTCCTCATGATA
GAGGCTGTGAAGCTCACTCTGATGGTGACGATTTGCTTCACTGTGTTGCTGATGCAATTTTGGGAGCTCTGGGGCTTCCTGATATTGGGCAGATT
TTCCCTGACACTGACCCTAAATGGAAGGGTGCGCCTTCTTCGGTGTTCATGGAAGAAGCTGTGCGTCTAATGCATGAAACAAGTTATGAATTGGG
AAACCTAGA
CGTCTTCACTATTTTTTTCAACTCCAATTCCAACCAAACTAATCTCAAAGCAAAAACCCTTTTCTCATCACTCTTCAAATCCTCTTTTGCCCCAA
TCAACAATCAAACCCTTGAGGAGTTTGGTGGTTTCTTCTGCAGCTGCAATTGAAGCTGAAACAGAAACATCTAGCTCGAATTCCACTCCGTTGAA
GTCTCTTCCTTTTAGAGTCGGCCATGGATTTGACCTTCATCGATTGGAACCTGGTTATCCTTTGATTATTGGTGGGATTAATATTCCTCATGATA
GAGGCTGTGAAGCTCACTCTGATGGTGACGATTTGCTTCACTGTGTTGCTGATGCAATTTTGGGAGCTCTGGGGCTTCCTGATATTGGGCAGATT
TTCCCTGACACTGACCCTAAATGGAAGGGTGCGCCTTCTTCGGTGTTCATGGAAGAAGCTGTGCGTCTAATGCATGAAACAAGTTATGAATTGGG
AAACCTAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E298375] | SGN-U568497 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T110412 [Download][View] | Facility Assigned ID: TMEGG90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0175 | Quality Trim Threshold: 14.5 |
Working
