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EST details — SGN-C82879

Search information 
Request: 82879Match: SGN-C82879
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C82879Clone name: cLET-22-D11
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C184592 is on microarray TOM1: SGN-S1-1-3.3.14.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184592 [TUS-45-C22] Trace: SGN-T198610 EST: SGN-E397284 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E294654Length: 516 bp (964 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E294654 [] (trimmed) CAAATAAAGCTGTGAAGCCCATCCGTCCTATCATTGCTGATTCTGCCCTCATCAGTTTTGCAGAAGGAAATTAAGGGGGATTTTGCTGAATCAGC
CAGGCCATAGTTCCTTTTAGTATTTTTTTTTTCTTTTACAGTCATTCCGAGACAGAAATCCATTTTGTTTATGTGTGTGTTGTCCCTATACTCCA
TTTAATAAGAGTCCTACGTGCTATTGAAGCTGCTGAAATGGAAAGGTACCAGATAATTAAAGAAGTTGGTAATGGTACATTTGGAAATGTTTGGC
GTGCACTTAATAAGCAGACTGGTGAAGTGGTTGCGATTAAAAAGATGAAGAGGAATTATTATTCGTGGGAAGAATGCATAAACTTGAGAGAGGTC
AAGTCTCTGAGAAAAATGAACCATTCAAATATCGTGAAGCTCAAGGAAGTGGTCAGGGAGAACGACATTTTGTACTTCGTGTTTGAATACATGGA
GTGCAATCTATACCAACTTATGAAGGACAGAGCAAAGCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E294654] SGN-U567969 Tomato 200607 Build 2 48 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T108040 [Download][View] Facility Assigned ID: TMEDI18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5