EST details — SGN-C82437
| Search information |
| Request: 82437 | Match: SGN-C82437 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82437 | Clone name: cLET-1-O24 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179581 is on microarray TOM1: SGN-S1-1-6.3.1.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179581 [TUS-32-C3] | Trace: SGN-T185715 | EST: SGN-E373052 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179581 [TUS-32-C3] | Trace: SGN-T185716 | EST: SGN-E373053 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292373 | Length: 608 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292373 [] (trimmed)
TTTTGAGATTTTTTTTCTTAATTCATACAAAATAAAATGGCTAATGATGAGGTGATTCTGTTGGATTTTTGGCCTAGCATGTATGGTATGAGGCT
AAGGATTGCACTTGCTGAGAAAGAGATTAAATATGAGTACAGAGACGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTC
ACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGTGAGTCTATCATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCC
CCTTTGCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGACAAGAAGTTATATGCTACAGGAAGCAAGATTTA
TACAGCAACGGGAGACGAACAAGAGGCAGGTAAGAAAGATTTCGTAGAAATCCTTAAAGTGTTGGAGGGAGCACTTGGAGAGAAGCCTTATTATG
GAGGAGATAACTTTGGTTTTGGGGATATTGCTCTCATTGGGTTCTACTGCTGGTTTCATGCTTATGAGGTTTATGGTAACTTCAGCATTGAGGCT
GAGTGCCCAAACCTTGTGGCTTGGGCCAAGAGGTGCAT
AAGGATTGCACTTGCTGAGAAAGAGATTAAATATGAGTACAGAGACGAGGATTTGAGGAACAAAAGTCCTCTGCTTTTGCAGATGAATCCTATTC
ACAAGAAAATCCCTGTTTTGATTCATAATGGCAAACCAATTTGTGAGTCTATCATTGGAGTTGAGTATATTGATGAAGTGTGGAAGGATAAAGCC
CCTTTGCTCCCTTCTGATCCTTATGAGAGAGCACAAGCTAGGTTTTGGGCTGATTACATTGACAAGAAGTTATATGCTACAGGAAGCAAGATTTA
TACAGCAACGGGAGACGAACAAGAGGCAGGTAAGAAAGATTTCGTAGAAATCCTTAAAGTGTTGGAGGGAGCACTTGGAGAGAAGCCTTATTATG
GAGGAGATAACTTTGGTTTTGGGGATATTGCTCTCATTGGGTTCTACTGCTGGTTTCATGCTTATGAGGTTTATGGTAACTTCAGCATTGAGGCT
GAGTGCCCAAACCTTGTGGCTTGGGCCAAGAGGTGCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292373] | SGN-U580842 | Tomato 200607 | Build 2 | 47 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102647 [Download][View] | Facility Assigned ID: TMEAB96TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |
Working
