EST details — SGN-C82322
| Search information |
| Request: 82322 | Match: SGN-C82322 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82322 | Clone name: cLET-1-J2 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179496 is on microarray TOM1: SGN-S1-1-3.3.2.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179496 [TUS-31-O14] | Trace: SGN-T185250 | EST: SGN-E373808 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292241 | Length: 655 bp (894 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E292241 [] (trimmed)
GAAAAGTGCAAAAAAAGTAGAAAAATCCATTCTTTCACAATAAAGTTTCAATCTTACACAATCTCTCACTTGGGTATTCAAGAAAAGTGCAAAAA
AAAAAGCATAAAATCCGTTCTTTTACAGTAAAGCTTGAATCTTTACACAATTTTCTCACTTGGGTACCCGAGAAAACCGCAGAAAAAAGCTCATG
GAGATCAACAACAACAACAATCAATCATCTTTCTGGCAGTTCAGTGACCAGCTTCGTCTGCAGAACAACAACTTAGCAAATCTCTCTTTGAATGA
TTCAATTTGGAGCAGTAACTATGGTTCTAAAAGGCCTGAAGAAAGAAGAAATTTTGATATCAGGGTAGGTGGTGACCTCAACTCTATTGCTAATA
CTTCTTCAAACAAGTCAAATTACAATCTTTTTAGCAATGATGGCTGGAAAATTGCTGACCCATCTGCTCTCACGGCGGCGAACGGCGGTGCTGCT
GCCGGAAATGGGGTACTTGGGGTTGGTTTAAATGGCGGATTCAACAAAGGGGTTTACTCAAATCAAGCTTTGAACTTCAGTTATAATAAGGGTAC
TAATAATGTTGCAGTAGGTACAAAGGGGATAAACAAGAAATTTGGTAAAGGTTTTTTTGAAGATGAGCAGAAAAGTGTGAAGAAG
AAAAAGCATAAAATCCGTTCTTTTACAGTAAAGCTTGAATCTTTACACAATTTTCTCACTTGGGTACCCGAGAAAACCGCAGAAAAAAGCTCATG
GAGATCAACAACAACAACAATCAATCATCTTTCTGGCAGTTCAGTGACCAGCTTCGTCTGCAGAACAACAACTTAGCAAATCTCTCTTTGAATGA
TTCAATTTGGAGCAGTAACTATGGTTCTAAAAGGCCTGAAGAAAGAAGAAATTTTGATATCAGGGTAGGTGGTGACCTCAACTCTATTGCTAATA
CTTCTTCAAACAAGTCAAATTACAATCTTTTTAGCAATGATGGCTGGAAAATTGCTGACCCATCTGCTCTCACGGCGGCGAACGGCGGTGCTGCT
GCCGGAAATGGGGTACTTGGGGTTGGTTTAAATGGCGGATTCAACAAAGGGGTTTACTCAAATCAAGCTTTGAACTTCAGTTATAATAAGGGTAC
TAATAATGTTGCAGTAGGTACAAAGGGGATAAACAAGAAATTTGGTAAAGGTTTTTTTGAAGATGAGCAGAAAAGTGTGAAGAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292241] | SGN-U578450 | Tomato 200607 | Build 2 | 55 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102515 [Download][View] | Facility Assigned ID: TMEAD49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 14.5 |
Working
