EST details — SGN-C82312
| Search information |
| Request: 82312 | Match: SGN-C82312 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82312 | Clone name: cLET-1-J1 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179490 is on microarray TOM1: SGN-S1-1-1.3.2.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179490 [TUS-31-O8] | Trace: SGN-T185342 | EST: SGN-E373900 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179490 [TUS-31-O8] | Trace: SGN-T185343 | EST: SGN-E373901 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292397 | Length: 589 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292397 [] (trimmed)
CCCATCTTCTTATTTTCCAACTTTCTTCCAATGGCCAGTGTTGAGGTTGAATCTGCACCAGTAGCACCAGTAGAGACTACTCCAGCTGAGGTTGA
AGTTACCCCAGCTCCAGAGGTAAACAAGGCGGAGGAACCAGCCCCCGCTGTAGAAAAGGATGTTGAGGTCGAATCAGCACCAGCACCAGAAGAGG
CTGCTCCTGCTGCGGAGGAAGTAGCAGCCCCTGTAGCTGAAGAGCCTGCGGCTGCAGAACCTGTAGCCGCAGAATCAGAAGAGCCAGTGGCAGTT
GCAGCAGAACCTGTTGCAGCTCCAGTTGAAGAACCTGTGGCTGCAGAAGAACCTGCAGCCGCAGCTGAGGAACCGGTTGCTGCAGCACCCGTTGA
GGAGGCTCCAGCACCCGTAGCTGAACCCGAAGCAGCCCCAGTTGCAGAACCCGAAGCAGAGAAAACAGAGGAATCTGCCCCTGCATCTGAGGAGC
CAGAGAAAGTTGAAGAGTAAAATTCAAATGGCTGATGAATGATGGTTTTTTTTTTTTTTTATATTGAAATTTGGTTGTGTTTATTGCGTTTTTTA
GTTGAGTATTTTATTTACT
AGTTACCCCAGCTCCAGAGGTAAACAAGGCGGAGGAACCAGCCCCCGCTGTAGAAAAGGATGTTGAGGTCGAATCAGCACCAGCACCAGAAGAGG
CTGCTCCTGCTGCGGAGGAAGTAGCAGCCCCTGTAGCTGAAGAGCCTGCGGCTGCAGAACCTGTAGCCGCAGAATCAGAAGAGCCAGTGGCAGTT
GCAGCAGAACCTGTTGCAGCTCCAGTTGAAGAACCTGTGGCTGCAGAAGAACCTGCAGCCGCAGCTGAGGAACCGGTTGCTGCAGCACCCGTTGA
GGAGGCTCCAGCACCCGTAGCTGAACCCGAAGCAGCCCCAGTTGCAGAACCCGAAGCAGAGAAAACAGAGGAATCTGCCCCTGCATCTGAGGAGC
CAGAGAAAGTTGAAGAGTAAAATTCAAATGGCTGATGAATGATGGTTTTTTTTTTTTTTTATATTGAAATTTGGTTGTGTTTATTGCGTTTTTTA
GTTGAGTATTTTATTTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292397] | SGN-U581194 | Tomato 200607 | Build 2 | 457 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102671 [Download][View] | Facility Assigned ID: TMEAC49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 14.5 |
Working
