EST details — SGN-C82213
| Search information |
| Request: 82213 | Match: SGN-C82213 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82213 | Clone name: cLET-1-E15 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179421 is on microarray TOM1: SGN-S1-1-6.4.2.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82213 [cLET-1-E15] | Trace: SGN-T102559 | EST: SGN-E292285 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C179421 [TUS-31-L11] | Trace: SGN-T185415 | EST: SGN-E373277 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179421 [TUS-31-L11] | Trace: SGN-T185416 | EST: SGN-E373278 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292081 | Length: 579 bp (864 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292081 [] (trimmed)
GAAGAACAGCAGACGCAATGGGTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGG
TGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAAGCAGGG
TTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCA
CACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATT
AATGAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAA
CCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATACAGAGGACTCCGAGGAAGAGGACATCTCCACCACAAGGCTC
GCCCCTCAA
TGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAAGCAGGG
TTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCA
CACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATT
AATGAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAA
CCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATACAGAGGACTCCGAGGAAGAGGACATCTCCACCACAAGGCTC
GCCCCTCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292081] | SGN-U565714 | Tomato 200607 | Build 2 | 97 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102355 [Download][View] | Facility Assigned ID: TMEAA32THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
