EST details — SGN-C82163

Search information 
Request: 82163Match: SGN-C82163
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C82163Clone name: cLET-1-B4
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179391 is on microarray TOM1: SGN-S1-1-4.3.2.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179391 [TUS-31-K5] Trace: SGN-T185139 EST: SGN-E372682 Direction: 3' Facility: INRA
Clone: SGN-C179391 [TUS-31-K5] Trace: SGN-T185140 EST: SGN-E372683 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292219Length: 456 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292219 [] (trimmed) AGGCCGTCGGTAAGAACAAGCGAATTTCCAAAGGCAAAAAAGGAGGGAAGAAGAAGGCAGCTGATCCATATGCTAAAAAGGATTGGTATGATATC
AAAGCTCCATCAGTATTTGGTGTCCGCAATGTAAGGAAGACCCTTGTTACCCGTACACAGGGTACAAAGATTGCTTCAGAAGGCCTGAAGCATCG
TGTGTTCGAAGTGTCATTGGCTGATCTTCAGAATGACGAAGATCACTCCTTCAGGAAGATTCGTCTGAGAGCTGAAGACGTCCAAGGAAGAAATG
TCTTGACAAACTTTCACGGTATGGATTTCACCACAGATAAATTGAGGTCACTGGTAAAGAAATGGCAATCATTGATTGAGGCTCATGTTGACGTT
AAGACAACTGATAGCTACACCTTGAGAATGTTCTGCATTGGCTTTACCAAAAAGCGTCCAAACCAACAAAAAAGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292219] SGN-U580590 Tomato 200607 Build 2 97 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T102493 [Download][View] Facility Assigned ID: TMEAD02TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0315 Quality Trim Threshold: 14.5