EST details — SGN-C81885
| Search information |
| Request: 81885 | Match: SGN-C81885 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81885 | Clone name: cLET-18-L9 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183566 is on microarray TOM1: SGN-S1-1-5.1.2.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183566 [TUS-42-I4] | Trace: SGN-T195037 | EST: SGN-E393711 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183566 [TUS-42-I4] | Trace: SGN-T195038 | EST: SGN-E393712 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183566 [TUS-42-I4] | Trace: SGN-T195038 | EST: SGN-E399269 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183566 [TUS-42-I4] | Trace: SGN-T195039 | EST: SGN-E393713 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293391 | Length: 499 bp (845 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293391 [] (trimmed)
CCCCCGGCCTGCAGGGGCGTTGGAAGGATTACATAAAAGGCATTAAATCTGCATATACAAAAGAATTTTGCAGGTAAAGATCCTGTGAAGCGTCA
GATTGCAGTTGCAACTTATCTTATCGATAAATTAGCTCTGAGGGCAGGGAATGAGAAGGATGATGACGACGCTGATACAGTTGGTTGCTGTACTT
TGAAAGTAGAGAATGTAGAGCCAGTACCTCCAAATATTTTGAAGTTCGATTTTCTTGGTAAAGATTCTATCAGGTACCAAAATGAGGTGGCTGTG
TATGAGCCTGTTTTTAAAGCTATTCAACAGTTCCGAAGTGGAAAAAAGGGCAGTGACGATCTTTTTGACAAGCTTGATACGAGTAAGCTTAATGC
CCATCTAAAGGAACTCATGCCAGGGCTCACAGCAAAAGTATTTCGTACATATAATGCATCTTTTACATTGGAGCAGCAAGTAAGTTGCTTTCAGA
GACTAGACGTTTTTTTTGACTACT
GATTGCAGTTGCAACTTATCTTATCGATAAATTAGCTCTGAGGGCAGGGAATGAGAAGGATGATGACGACGCTGATACAGTTGGTTGCTGTACTT
TGAAAGTAGAGAATGTAGAGCCAGTACCTCCAAATATTTTGAAGTTCGATTTTCTTGGTAAAGATTCTATCAGGTACCAAAATGAGGTGGCTGTG
TATGAGCCTGTTTTTAAAGCTATTCAACAGTTCCGAAGTGGAAAAAAGGGCAGTGACGATCTTTTTGACAAGCTTGATACGAGTAAGCTTAATGC
CCATCTAAAGGAACTCATGCCAGGGCTCACAGCAAAAGTATTTCGTACATATAATGCATCTTTTACATTGGAGCAGCAAGTAAGTTGCTTTCAGA
GACTAGACGTTTTTTTTGACTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293391] | SGN-U579225 | Tomato 200607 | Build 2 | 56 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107216 [Download][View] | Facility Assigned ID: TMECS65TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0152 | Quality Trim Threshold: 14.5 |
Working
