EST details — SGN-C81860
| Search information |
| Request: 81860 | Match: SGN-C81860 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81860 | Clone name: cLET-18-J23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183275 is on microarray TOM1: SGN-S1-1-8.1.3.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183275 [TUS-41-M1] | Trace: SGN-T191512 | EST: SGN-E390186 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183275 [TUS-41-M1] | Trace: SGN-T197566 | EST: SGN-E396240 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293388 | Length: 520 bp (821 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293388 [] (trimmed)
GCAAAACAGATGGTTGTCACTTTTGGTATGTCTGAACTTGGCCCGTGGTCCCTCATGGATTCTTCAGCCCAAAGTGGTGATGTAATCATGAGAAT
GATGGCCAGGAACTCGATGTCAGAAAAGCTAGCTGAAGACATTGATGTTGCTGTGAAGAAGCTTTCAGACAGTGCATATGAGATTGCATTGAGCC
AAATCCGCAGCAACCGTGAAGCAATTGATAAGATTGTGGAAGTCCTCCTTGAAAAGGAGACGATGACTGGAGATGAATTCCGTGCTATTCTCTCA
GAATTTGTTGAAATTCCTGCTGAAAACCGCGTCCCTGCTGCTGTTCCTACCCCAGCAGCTGTATAATAGCTGGAACATATACTGCAACTTGTACA
ATTCACATACACTTATCCCCCTAATTTGATCTAGAGTATAAACAATATATAGACTATAAGAAAGTTAAAAAACACCTTTGTGCATTTGTGTATGA
AGCAAATTTTCACATTTGATATAGAACTAGTCTTTTCTTCACTGT
GATGGCCAGGAACTCGATGTCAGAAAAGCTAGCTGAAGACATTGATGTTGCTGTGAAGAAGCTTTCAGACAGTGCATATGAGATTGCATTGAGCC
AAATCCGCAGCAACCGTGAAGCAATTGATAAGATTGTGGAAGTCCTCCTTGAAAAGGAGACGATGACTGGAGATGAATTCCGTGCTATTCTCTCA
GAATTTGTTGAAATTCCTGCTGAAAACCGCGTCCCTGCTGCTGTTCCTACCCCAGCAGCTGTATAATAGCTGGAACATATACTGCAACTTGTACA
ATTCACATACACTTATCCCCCTAATTTGATCTAGAGTATAAACAATATATAGACTATAAGAAAGTTAAAAAACACCTTTGTGCATTTGTGTATGA
AGCAAATTTTCACATTTGATATAGAACTAGTCTTTTCTTCACTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293388] | SGN-U565008 | Tomato 200607 | Build 2 | 66 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107213 [Download][View] | Facility Assigned ID: TMECS60TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 12.5 |
Working
