EST details — SGN-C80814
| Search information |
| Request: 80814 | Match: SGN-C80814 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80814 | Clone name: cLET-13-H23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179789 is on microarray TOM1: SGN-S1-1-6.3.1.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179789 [TUS-32-K19] | Trace: SGN-T185850 | EST: SGN-E373187 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179789 [TUS-32-K19] | Trace: SGN-T185851 | EST: SGN-E373188 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293972 | Length: 619 bp (876 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293972 [] (trimmed)
GTTGAAAGATCACTTTGCCATGACCTGAAAGCTCTTCTTTTTCATTGCTTAAGCTTTCTTCAATCACCCACAAGAATGTCAATGGCCTTATTCTC
ATCTCCCCCACTTCACTTCCCTACTCTTACCCCTTCAAAACATCACCTAACCCCCCAACCTTATCCTTCTATAAGTTTCAAGAAACCCCATCTCT
CTTTCTTGGTTTCTCCAAAGGCCACTGATAATGGGTCAAGTGGTGATGGTTCCTCTTCTTCTGTTACTGTAGAGCAGGAAGTACTCTAGGAAAAA
GCTCAGGACGGTCCTGTGGAAGTTGAGGAGTCAAATGAGGCTTCTGTCGGCTCTAACGGGTCACCGCCGGTGGCTTCCGCCGGAGCTCCTGCGCC
GGAGATTGTGAGGATGTTTCAAGATCCGAGATGGGTTGGTGGGACTTGGGATTTGAAGCAATTTCAGAAAGACGGAGAGACCCATTGGGATTCTG
TTATTGATGCTGAGGTTAGGAGAAGGAAATGGTTGGAAGATAACCCAAAGTCATCAAGTAATGAAGAACCTGTGCTTTTCGACACTTCCATTATT
CCTTGGTGGGCATGGATGAAGAGAATCCATCTCCCTGAAGCTGAACTTC
ATCTCCCCCACTTCACTTCCCTACTCTTACCCCTTCAAAACATCACCTAACCCCCCAACCTTATCCTTCTATAAGTTTCAAGAAACCCCATCTCT
CTTTCTTGGTTTCTCCAAAGGCCACTGATAATGGGTCAAGTGGTGATGGTTCCTCTTCTTCTGTTACTGTAGAGCAGGAAGTACTCTAGGAAAAA
GCTCAGGACGGTCCTGTGGAAGTTGAGGAGTCAAATGAGGCTTCTGTCGGCTCTAACGGGTCACCGCCGGTGGCTTCCGCCGGAGCTCCTGCGCC
GGAGATTGTGAGGATGTTTCAAGATCCGAGATGGGTTGGTGGGACTTGGGATTTGAAGCAATTTCAGAAAGACGGAGAGACCCATTGGGATTCTG
TTATTGATGCTGAGGTTAGGAGAAGGAAATGGTTGGAAGATAACCCAAAGTCATCAAGTAATGAAGAACCTGTGCTTTTCGACACTTCCATTATT
CCTTGGTGGGCATGGATGAAGAGAATCCATCTCCCTGAAGCTGAACTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293972] | SGN-U578160 | Tomato 200607 | Build 2 | 92 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105815 [Download][View] | Facility Assigned ID: TMEBY48TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0248 | Quality Trim Threshold: 14.5 |
Working
