EST details — SGN-C80752
| Search information |
| Request: 80752 | Match: SGN-C80752 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80752 | Clone name: cLET-13-E5 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179773 is on microarray TOM1: SGN-S1-1-6.3.1.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179773 [TUS-32-K3] | Trace: SGN-T185758 | EST: SGN-E373095 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179773 [TUS-32-K3] | Trace: SGN-T185759 | EST: SGN-E373096 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294045 | Length: 551 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294045 [] (trimmed)
TAACATCATTATCAATAGTCAATTCATGTGCTATGGGTTCATATCTACATAAATTTCTGCTCCCTGACAAAAGTAGTAGGTTCAGATGAACTGAA
CATCAATACTCTGCATCAACCTATGTTTTCAACTACTACTTGATACTCTTCCTCCATCACACCTCAGAGGCGGAGCCATGATTTCAATAAATACT
AATTACTTAGTTCTAAATCTAACTTAGTACATATTTAATGAATGTCTTCTATACAAATGCATTGTTTCATGAAAAGCAACTTAGTCCGACCGAAT
CCTTATCTAAGCTTCTACCTCCACCCCCTTACACAAGTAAAACTAACACATGAAACTCGTATATGTCTAGTCAAACACCGTAACAATAAATGAAC
CGGATGACTAATCCTTTTATGTTACTATTTTCGACATAGATGGGAATGCATGCATGCATGCTATGAAAGATAAGGTCAAGTCTGATACATCAACC
GTCTCTTTTTATTATTATTACATAATAATGTATTCTTTTGTAGTTGCAACTATTGGGATGTCTTGCTGGAGTTGAA
CATCAATACTCTGCATCAACCTATGTTTTCAACTACTACTTGATACTCTTCCTCCATCACACCTCAGAGGCGGAGCCATGATTTCAATAAATACT
AATTACTTAGTTCTAAATCTAACTTAGTACATATTTAATGAATGTCTTCTATACAAATGCATTGTTTCATGAAAAGCAACTTAGTCCGACCGAAT
CCTTATCTAAGCTTCTACCTCCACCCCCTTACACAAGTAAAACTAACACATGAAACTCGTATATGTCTAGTCAAACACCGTAACAATAAATGAAC
CGGATGACTAATCCTTTTATGTTACTATTTTCGACATAGATGGGAATGCATGCATGCATGCTATGAAAGATAAGGTCAAGTCTGATACATCAACC
GTCTCTTTTTATTATTATTACATAATAATGTATTCTTTTGTAGTTGCAACTATTGGGATGTCTTGCTGGAGTTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294045] | SGN-U580875 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105888 [Download][View] | Facility Assigned ID: TMEBW27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
