EST details — SGN-C80077

Search information 
Request: 80077Match: SGN-C80077
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C80077Clone name: cLET-11-D11
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179622 is on microarray TOM1: SGN-S1-1-5.4.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179622 [TUS-32-D20] Trace: SGN-T186213 EST: SGN-E372732 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292872Length: 548 bp (832 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E292872 [] (trimmed) TCTCTCTACTTTCTTTCTCTTAACACTGAGCAGTAAGCGAGTGAGTATGAGAAAAATGGCTGCCAATATGATGCTCTACATTACTATTACTGTTC
TTCTCTGTTTTCTCACTGCCGTCAATGCCAGAATCCCCGGCGTTTATACCGGCGGACCATGGCAAACCGCCCACGCCACCTTCTACGGTGGCTCT
GACGCATCTGGAACTATGGGTAATTACTATACTCTCTCTCTCAGTTGCAGAGCTTGAATCCAGTAGCAGTAGCTTTTACTCAAACAATGTTAAGT
AGTTCGCTAAATATATACAAATATTAGATTTAGAACTCAGTTATTGGTATTAGAAGTGAAAAGCTATATTTGAAAAATCGAAGTTGTGTTTAGTT
ATGAATACTTACTGGAGTTGTTTTTGAATTGTTGTGAATAATTTAGAGTGAAGATATAACTTCTCTTCGAGTTGAATTTTGAAATTTTCGGAAAT
GTAATGGCTAAATGTGTTTTCATAGCCTTGTTCATAGATTAATAATTAATAAAATTGCAAATCTGGATCCCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292872] SGN-U578013 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105335 [Download][View] Facility Assigned ID: TMEBQ18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0075 Quality Trim Threshold: 12.5