EST details — SGN-C78754
| Search information |
| Request: 78754 | Match: SGN-C78754 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78754 | Clone name: cLES-6-K22 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185474 is on microarray TOM1: SGN-S1-1-1.4.9.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E286993 | Length: 697 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E286993 [] (trimmed)
AATTTTTTAGAAAAAAGAAGAACGAATCTTCAACTCCCATAGAGTGATGGCAGAAGTAATAGGAGCGCCAGCAGCAGCTCAGGTTAAATCAATCT
TTGTATATCCAATTAAATCATGCCGTGGAATTTCTGTTTCTCAAGCACCTATCACTTCTACTGGATTTCGATGGGATCGACAATGGTTAGTGGTG
AATTCCAAAGGCAGGGCCTATACTCAAAGAGTTGAACCAAAGCTTGCTCTTGTCGAAGTGGCATTGCCAATTGAGGCCTTTTCTGAAGGCTGGGA
ACCAAATAATGACTCTTATCTAGTTATCAAAGCTCCCGGTATGGATCCACTGAAAATTCCACTAAGTGACCCATCTGTAGTGTCGGATGGTGTCT
CGGTCTGGGAGTGGTCTGGTTCTGCCTTGGACGAGGGAGCTGAGGCAGCTATGTGGTTCTCCACACATCTGGGGAAACCAAGTCGGCTAGTTCGC
TTTAGTGAAGTTAAGGAAATGAGAGTTGTAGATCCTAATTATGCTCAAGGATACAATGTTATGTTTTCTGATGGATATCCATACCTCATGCTATC
CCAGGGATCGATGAATGCGTTAAATTCTCTTCTCAAGGAGCCTGTTCCAGTAAATCGTTTTAGACCCAATGTCCTTGTTGATGGATGTGAACCAT
TTGCTGAGGATTTGTGGAAGGAGATCCAAATC
TTGTATATCCAATTAAATCATGCCGTGGAATTTCTGTTTCTCAAGCACCTATCACTTCTACTGGATTTCGATGGGATCGACAATGGTTAGTGGTG
AATTCCAAAGGCAGGGCCTATACTCAAAGAGTTGAACCAAAGCTTGCTCTTGTCGAAGTGGCATTGCCAATTGAGGCCTTTTCTGAAGGCTGGGA
ACCAAATAATGACTCTTATCTAGTTATCAAAGCTCCCGGTATGGATCCACTGAAAATTCCACTAAGTGACCCATCTGTAGTGTCGGATGGTGTCT
CGGTCTGGGAGTGGTCTGGTTCTGCCTTGGACGAGGGAGCTGAGGCAGCTATGTGGTTCTCCACACATCTGGGGAAACCAAGTCGGCTAGTTCGC
TTTAGTGAAGTTAAGGAAATGAGAGTTGTAGATCCTAATTATGCTCAAGGATACAATGTTATGTTTTCTGATGGATATCCATACCTCATGCTATC
CCAGGGATCGATGAATGCGTTAAATTCTCTTCTCAAGGAGCCTGTTCCAGTAAATCGTTTTAGACCCAATGTCCTTGTTGATGGATGTGAACCAT
TTGCTGAGGATTTGTGGAAGGAGATCCAAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286993] | SGN-U575871 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98445 [Download][View] | Facility Assigned ID: TPSAV71THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
