EST details — SGN-C78608
| Search information |
| Request: 78608 | Match: SGN-C78608 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78608 | Clone name: cLES-6-D16 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179035 is on microarray TOM1: SGN-S1-1-8.4.2.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179035 [TUS-30-L9] | Trace: SGN-T184703 | EST: SGN-E372263 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179035 [TUS-30-L9] | Trace: SGN-T184704 | EST: SGN-E372264 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287201 | Length: 580 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287201 [] (trimmed)
CAACTTCTTGCAGACGCACTGCGCTATTATTATTTTGACAGCGATAGTGTTGTTGAACAAGCTTTGGGAGGAAAGGATGCTGTCCGGTCGTTTAT
GAAGACAGACTTGAAGGGATTTCGTGATTCGGAGACGGAGGTACTGAAGCAGTTGTCATCCATGGGTCGCCTTGTTGTTTGTGCTGGGAATGGTG
CAGTTCAGTGTGCAGCAAATCTGGCGCTTATGAGACACGGCATATCAATATGGATCGATGTCCCCTTGGATATGGTAGCCAAGCAGATTGTGGAG
GAGAAATTTCAACTTCCTGCTGCTGAAGCAATAAATGGATCATATTCCGAGGTGTTGACTCAATTAACTGCTATTTATGAAGATAGCCGTAATGG
ATATGCTACAGCTGATACAACTATTGCACTACAGAATACTGCTTCTCGGCTAGGCTATGATACACTGGACGCAGTGACCACAGAAGATATGGTTT
TGGAGACTCTGAAGGAGGTAGAGAGATTGATGAGATCAAAAAAGTTGATGGAAGAAGCTGCCAGGCCATTTTAGTTTCATTCACCACCAATAACA
ATTATTTATT
GAAGACAGACTTGAAGGGATTTCGTGATTCGGAGACGGAGGTACTGAAGCAGTTGTCATCCATGGGTCGCCTTGTTGTTTGTGCTGGGAATGGTG
CAGTTCAGTGTGCAGCAAATCTGGCGCTTATGAGACACGGCATATCAATATGGATCGATGTCCCCTTGGATATGGTAGCCAAGCAGATTGTGGAG
GAGAAATTTCAACTTCCTGCTGCTGAAGCAATAAATGGATCATATTCCGAGGTGTTGACTCAATTAACTGCTATTTATGAAGATAGCCGTAATGG
ATATGCTACAGCTGATACAACTATTGCACTACAGAATACTGCTTCTCGGCTAGGCTATGATACACTGGACGCAGTGACCACAGAAGATATGGTTT
TGGAGACTCTGAAGGAGGTAGAGAGATTGATGAGATCAAAAAAGTTGATGGAAGAAGCTGCCAGGCCATTTTAGTTTCATTCACCACCAATAACA
ATTATTTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287201] | SGN-U582564 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98653 [Download][View] | Facility Assigned ID: TPSAX20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
