EST details — SGN-C78444

Search information 
Request: 78444Match: SGN-C78444
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C78444Clone name: cLES-5-L1
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184655 is on microarray TOM1: SGN-S1-1-4.2.14.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184655 [TUS-45-F13] Trace: SGN-T198680 EST: SGN-E397354 Direction: 3' Facility: INRA
Clone: SGN-C184655 [TUS-45-F13] Trace: SGN-T198681 EST: SGN-E397355 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E285667Length: 365 bp (783 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E285667 [] (trimmed) GCAATATATGAAGTACAATCCAAGAGTATCCTCCTCTCGCCGGATGAGCAGGAAGGCTCATTTCACGGCGCCTTCAAGTGCGCGCCGGATTTTAA
TGAGCGCACCCTTATCGTCCGAGTTACGTGTAAAGTACAACGTAAGATCTATGCCGGTGAGGAAAGATGACGAAGTTCAGGTTGTTCGTGGAACT
TACAAGGGCCGTGACGGGAAAGTTGCCCAAGTGTACCGTACGAAATGGGTGATCCACATTGAACGTATAACCAGAGAGAAGGTCAATGGATCTAC
TGAGAACGTTGGTATTCATCCTTCGAAGGTGGTTGTTACAAAGCTAAGGCTTGACGAAGACAGGAGATCGCTACTCGACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E285667] SGN-U579485 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T98150 [Download][View] Facility Assigned ID: TPSAS61TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.990 Expected Error Rate: 0.0172 Quality Trim Threshold: 12.5