EST details — SGN-C77208
| Search information |
| Request: 77208 | Match: SGN-C77208 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77208 | Clone name: cLES-20-E2 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185580 is on microarray TOM1: SGN-S1-1-7.1.9.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185580 [TUS-47-M2] | Trace: SGN-T191968 | EST: SGN-E390642 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185580 [TUS-47-M2] | Trace: SGN-T192203 | EST: SGN-E390877 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290529 | Length: 420 bp (750 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290529 [] (trimmed)
GAAGAAGTGGCACTGCAAACATATTTATTAAGAATTTGGACAAGGCAATTGACCACAAAGCACTACATGATACCTTTTCTGCATTCGGCAATATT
CTGTCTTGTAAGGTAGCTGTGGATTCATCAGGTCAGTCCAAGGGGTATGGGTTTGTGCAGTATGACAGTGAGGATGCTGCCCAAAAAGCTATTGA
GAAGCTTAATGGTATGCTGCTGAATGACAAGCAAGTATATGTTGGACCCTTTGTCCGGAAGCAAGAAAGAGATATGGCTGTAGATAAGACAAGAT
TTACCAATGTCTTTGTGAAAAATTTATCTGAAGCGACATCAGAAGAAGATCTCAAGAAAGCCTTTGATGAATTTGGTGCCATTACTAGCATTGCA
ATTATGAAAGATGAAGATGGAAAATCTCGGTCCTTTGGAT
CTGTCTTGTAAGGTAGCTGTGGATTCATCAGGTCAGTCCAAGGGGTATGGGTTTGTGCAGTATGACAGTGAGGATGCTGCCCAAAAAGCTATTGA
GAAGCTTAATGGTATGCTGCTGAATGACAAGCAAGTATATGTTGGACCCTTTGTCCGGAAGCAAGAAAGAGATATGGCTGTAGATAAGACAAGAT
TTACCAATGTCTTTGTGAAAAATTTATCTGAAGCGACATCAGAAGAAGATCTCAAGAAAGCCTTTGATGAATTTGGTGCCATTACTAGCATTGCA
ATTATGAAAGATGAAGATGGAAAATCTCGGTCCTTTGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290529] | SGN-U579015 | Tomato 200607 | Build 2 | 233 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102208 [Download][View] | Facility Assigned ID: TPSCZ25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0129 | Quality Trim Threshold: 14.5 |
Working
