EST details — SGN-C77186
| Search information |
| Request: 77186 | Match: SGN-C77186 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77186 | Clone name: cLES-20-D20 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179259 is on microarray TOM1: SGN-S1-1-8.1.2.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179259 [TUS-31-E17] | Trace: SGN-T185024 | EST: SGN-E372567 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179259 [TUS-31-E17] | Trace: SGN-T185025 | EST: SGN-E372568 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290443 | Length: 648 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290443 [] (trimmed)
TTTTAAAAAAGAAAAATACTTCTCATTCATATATTGATTAATTTATTGTTGAAACACGAATTACAAGCTATAGCATTGGCAACTCTTCTACATAA
TATTAATAGCAATGCCTATTTTTTTGTAATATAAATTCAAACAGTAGGGAACGAAGCAACCTTTGCAATGCCACAATGGCCACCATCAACTCCAA
CATCTCTAGCAATTCTCATATATCCTTCCTCACCCCAATCACTCCCCCATGAATTCTTCACTATCCAATATTTTGTACCATCTTCTTCACTTGTC
CCATAACCTATAACTGTCACTGCATGATTCAGTCTAGAATTACAACTTCCATCATATATTCCACTTCCGTACATATGAAACTCATCGTTAGCCGC
AATACCAACAGAAATAGGTTGATTCACTACAGCTTTCAACAACGATGACTCGTCAGATGGTACGACTTCGTAGCCATTGATAGTAACTGCTGCTG
GTTGTTCGGTCTTGCAAACAGAATATCAGAAAAGGACATTGCTTTATAACTGGAAACAATTTGGTGAATGGAAAAAAGAATCCTCCACCTTGTCA
AATAACCAAGAAACTGAAGCATTGCAGGTACCTCAGCTTTTCATTAAGGGGGTTAACTATACAGCTGGAATTGAAAAT
TATTAATAGCAATGCCTATTTTTTTGTAATATAAATTCAAACAGTAGGGAACGAAGCAACCTTTGCAATGCCACAATGGCCACCATCAACTCCAA
CATCTCTAGCAATTCTCATATATCCTTCCTCACCCCAATCACTCCCCCATGAATTCTTCACTATCCAATATTTTGTACCATCTTCTTCACTTGTC
CCATAACCTATAACTGTCACTGCATGATTCAGTCTAGAATTACAACTTCCATCATATATTCCACTTCCGTACATATGAAACTCATCGTTAGCCGC
AATACCAACAGAAATAGGTTGATTCACTACAGCTTTCAACAACGATGACTCGTCAGATGGTACGACTTCGTAGCCATTGATAGTAACTGCTGCTG
GTTGTTCGGTCTTGCAAACAGAATATCAGAAAAGGACATTGCTTTATAACTGGAAACAATTTGGTGAATGGAAAAAAGAATCCTCCACCTTGTCA
AATAACCAAGAAACTGAAGCATTGCAGGTACCTCAGCTTTTCATTAAGGGGGTTAACTATACAGCTGGAATTGAAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290443] | SGN-U580776 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102122 [Download][View] | Facility Assigned ID: TPSDB22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 14.5 |
Working
