EST details — SGN-C76972

Search information 
Request: 76972Match: SGN-C76972
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C76972Clone name: cLES-1-D5
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185420 is on microarray TOM1: SGN-S1-1-7.2.9.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185420 [TUS-47-F10] Trace: SGN-T192473 EST: SGN-E391147 Direction: 5' Facility: INRA
Clone: SGN-C185420 [TUS-47-F10] Trace: SGN-T192661 EST: SGN-E391335 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E283645Length: 484 bp (723 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E283645 [] (trimmed) CTTTCATTTCCTCTCCTCAATTTCTCTTTTGCTCTGCTACAATGGCTTCCACATTATCCACTATTGCCCTTTGTTCACCTTCTCACATTTCCCCC
TCCACACACGCTTCAATTTCTTTCCCCACCAAAACCCTACAACTCCCCATTCGCACTTCCAAACTCCACCACCGCCGAGCCACTTTTGTCCGCCC
TCTCGCCGCCGTCGAAGCACCGGAGAAGGTAGTCCAGCTCGGGGATGAAATCTCCACTTTAACCCTAGCTGACGCCCAGAAACTGGTTGAGTACC
TTCAGGATAAGCTTGGTGTTTCAGCCGCATCCTTCGCTCCTGCTGCCGTTGTCGCTGCCCCTGGTGGCGCAGCCGCAGATGCTCCAGCTGTGGTT
GAAGAGAAGACGGAATTTGACGTAGTCATCGATGAAGTGCCGAGTAATGCTAGAATTGCTACCATTAAGGCTGTTAGGGCTTTAACAAGTTTTGC
ATTGAAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E283645] SGN-U580694 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T97321 [Download][View] Facility Assigned ID: TPSAC15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0136 Quality Trim Threshold: 14.5