EST details — SGN-C76842
| Search information |
| Request: 76842 | Match: SGN-C76842 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C76842 | Clone name: cLES-19-I21 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185575 is on microarray TOM1: SGN-S1-1-4.4.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185575 [TUS-47-L21] | Trace: SGN-T192359 | EST: SGN-E391033 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185575 [TUS-47-L21] | Trace: SGN-T192360 | EST: SGN-E391034 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287781 | Length: 516 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287781 [] (trimmed)
TCTTTTTGAAAATAATATAACTCACAATAACAAGAATAGGAGCTAGTAAAAATGGGGAGATCACAGATCTGTAGTGCTTTAGCAATTTTAGCTTT
GTTCTTCTTCTCTTCAGCTTTGGCAGATGATGTCGTTGTTTTGACCGAAGAAAACTTCGACAAGGAGATCGGTCAAGATCGCGCTGCTCTCGTTG
AGTTCTACGCTCCTTGGTGTGGGCACTGTAAAAAGCTTGCTCCTGAGTATGAAAAGCTTGGTGCAAGTTTCAAGAAAGCAAAGTCTGTTTTGATC
GGAAAGATTGATTGTGATGAACATAAGAGTGTTTGCAGCANATATGGGGTTCAAGGTTACCCCACTATCCAATGGTTTCCAAAGGGATCACTGGA
GCCAAAAAAAATACGAAGGTGCACGATCTGCTGAAGCCCTTGCCGAGTACGTGAACAGCGAAGCAGGGACTAATGTGAAGATTGCTTCTATCCCG
TCTAGCGTTGTGGTGCTATCTTCAGATAACTTTGATGAAAT
GTTCTTCTTCTCTTCAGCTTTGGCAGATGATGTCGTTGTTTTGACCGAAGAAAACTTCGACAAGGAGATCGGTCAAGATCGCGCTGCTCTCGTTG
AGTTCTACGCTCCTTGGTGTGGGCACTGTAAAAAGCTTGCTCCTGAGTATGAAAAGCTTGGTGCAAGTTTCAAGAAAGCAAAGTCTGTTTTGATC
GGAAAGATTGATTGTGATGAACATAAGAGTGTTTGCAGCANATATGGGGTTCAAGGTTACCCCACTATCCAATGGTTTCCAAAGGGATCACTGGA
GCCAAAAAAAATACGAAGGTGCACGATCTGCTGAAGCCCTTGCCGAGTACGTGAACAGCGAAGCAGGGACTAATGTGAAGATTGCTTCTATCCCG
TCTAGCGTTGTGGTGCTATCTTCAGATAACTTTGATGAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287781] | SGN-U577569 | Tomato 200607 | Build 2 | 93 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101838 [Download][View] | Facility Assigned ID: TPSCU59TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0128 | Quality Trim Threshold: 14.5 |
Working
