EST details — SGN-C75023
| Search information |
| Request: 75023 | Match: SGN-C75023 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C75023 | Clone name: cLES-12-I20 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183237 is on microarray TOM1: SGN-S1-1-6.3.3.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183237 [TUS-41-K11] | Trace: SGN-T191712 | EST: SGN-E390386 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183237 [TUS-41-K11] | Trace: SGN-T197477 | EST: SGN-E396151 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286483 | Length: 399 bp (983 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286483 [] (trimmed)
CACAGAAAGTAACGTTCTATCTGGGGGCAAACCTGGCCCTCACAAAATTCAAGGGATTGGAGCAGGTTTTATTCCAGGAAACTTGGATCAAGATG
TAATGGATGAAGTGATAGAGATATCGAGTGACGAAGCTGTTGAAACTGCGAAGCAATTAGCCCTACAAGAAGGGTTGTTGGTTGGGATTTCTTCC
GGAGCAGCTGCTCTTGCTGCCATTCAAGTTGGAAAGAGACCTGAGAATGCAGGAAAGCTTATTGGGGTTGTATTTCCAAGCTATGGGGAACGATA
CCTCTCCTCTATTCTTTTCCAGTCAATAAGAGAGGAATGCGAGAACATGAAGCCAGAATTGTGAAGATCTTCTGATTCTTAATAAAATGCTATCT
GGCTTATCTAGCTGCCACA
TAATGGATGAAGTGATAGAGATATCGAGTGACGAAGCTGTTGAAACTGCGAAGCAATTAGCCCTACAAGAAGGGTTGTTGGTTGGGATTTCTTCC
GGAGCAGCTGCTCTTGCTGCCATTCAAGTTGGAAAGAGACCTGAGAATGCAGGAAAGCTTATTGGGGTTGTATTTCCAAGCTATGGGGAACGATA
CCTCTCCTCTATTCTTTTCCAGTCAATAAGAGAGGAATGCGAGAACATGAAGCCAGAATTGTGAAGATCTTCTGATTCTTAATAAAATGCTATCT
GGCTTATCTAGCTGCCACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286483] | SGN-U565168 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100014 [Download][View] | Facility Assigned ID: TPSBT58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 20.5 |


