EST details — SGN-C74306
| Search information |
| Request: 74306 | Match: SGN-C74306 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C74306 | Clone name: cLER-8-K22 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185976 is on microarray TOM1: SGN-S1-1-3.1.7.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E279808 | Length: 487 bp (765 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E279808 [] (trimmed)
AATAAGCAACATGTTATTCATGGATACTTCTAAAAAAAGAAGACAAATCGCAAGAAAGTTAAATTATTGTATACTAAACTAACACTACCAAGAAA
CTTTTTGAGAAGATATTTCTCTCTTTAATGTGTTAAAACAAGTCTTACAATATTTGTGAGAACTTGACATTTGGGCCCTTGACCGGACCCAATAG
GATTGAAAGGATATCTTCCCAAAGAATGAAGCAAGTGAAAATTGACCTTTTGAGGTGCACGCTAATCAAGCGTAGTCAGGCATTACTTTTTTAAG
GAATGTGATTGGCTTGGCTTCTTCGGGGACAATTTCATCAAATGGAACATAATTCCGCTCCTTATCATAGACATGACATACTGTCAGTATTGTCT
TCATTAGACGCCAGTTCCATGAAGCCTCGTTAAGGTACTTTCCCCAATTCTCTTGGAGAGATTGATGAGCTGCCCGTAAATTATAACTTGGTATT
CTGGGGGATATG
CTTTTTGAGAAGATATTTCTCTCTTTAATGTGTTAAAACAAGTCTTACAATATTTGTGAGAACTTGACATTTGGGCCCTTGACCGGACCCAATAG
GATTGAAAGGATATCTTCCCAAAGAATGAAGCAAGTGAAAATTGACCTTTTGAGGTGCACGCTAATCAAGCGTAGTCAGGCATTACTTTTTTAAG
GAATGTGATTGGCTTGGCTTCTTCGGGGACAATTTCATCAAATGGAACATAATTCCGCTCCTTATCATAGACATGACATACTGTCAGTATTGTCT
TCATTAGACGCCAGTTCCATGAAGCCTCGTTAAGGTACTTTCCCCAATTCTCTTGGAGAGATTGATGAGCTGCCCGTAAATTATAACTTGGTATT
CTGGGGGATATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279808] | SGN-U575055 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93710 [Download][View] | Facility Assigned ID: TPRBD71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 14.5 |


