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EST details — SGN-C73622

Search information 
Request: 73622Match: SGN-C73622
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C73622Clone name: cLER-5-H9
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185326 is on microarray TOM1: SGN-S1-1-5.2.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185326 [TUS-47-B12] Trace: SGN-T192648 EST: SGN-E391322 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E279700Length: 490 bp (850 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E279700 [] (trimmed) CAGATGGCTCATCAGTCTCTTTACCTTCTCTTCCTCGTTGTCTTGTCATCAATCAAGAGCCATGTAATTCAAGTTGAGGCTCGCCATCTTCTGGA
CGCAACTTTGCCAGATCTCCCCATTGGTCTCCCAAAACCTGAGCTACCAACATTACCTATGCCCAATCTTCCACTGCCGCAGCCTGGATTGCCCA
CACTACCTATGCCCAATCTTCCACTGCCGCAGCCTGGACTGCCCACATTACCTATGCCTAATCTTCCTCAGCCACAACTTCCAAACCCTCAGCTG
CCACCTTTGCCCAAACCGGATTTGCCATTACCTATGCCACAACTTCCCAAACCTCAGCTACCTCTGCCACAGTTGCCAATACCATTGCCACCTCT
GCCAAGCCCTTAAGTACTAATGTTCCTTCAATGATTGGGAAGTGTACTACGTGCTATCCAGGATGATTCGTTTGTATCATTATTGTCGNATTTGT
GAACCTGCTCATGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E279700] SGN-U577489 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T93209 [Download][View] Facility Assigned ID: TPRAS41TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0179 Quality Trim Threshold: 12.5