EST details — SGN-C73282
| Search information |
| Request: 73282 | Match: SGN-C73282 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C73282 | Clone name: cLER-4-B5 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184311 is on microarray TOM1: SGN-S1-1-4.4.16.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184311 [TUS-44-H5] | Trace: SGN-T198284 | EST: SGN-E396958 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184311 [TUS-44-H5] | Trace: SGN-T198285 | EST: SGN-E396959 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E277989 | Length: 514 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E277989 [] (trimmed)
TTTGTTTCTATTATAATATATGATCCTTTCTACTTTCTTTACTTGCTACAACAATACTTCACAAGAAAGACAATAAGCTACAACCACTTTAGCTA
AAGAAGAAAAAAGTTATGAAAAATCAAGAAGAAATAATCAACCTCGAAAATCGTCATGATTTCATTTCTAATGGCTTGAGTTTTCCTTCAAATAT
CGCGACATCACCATCATCATCATCTTCTTCTTCTTCTTTTTCCTCGAATAATGCATTAGTTTCAAAAAAGTGTAAGAGCTCGAAGAAAATTGAAG
AAGAGAAAAAGAAAAAGAAGATGAATAATGATGACGAAGATAAGCACCCAACCTATAGAGGGGTACGTAAGAGGAGTTGGGGCAAATGGGTGTCC
GAAATTCGCGAACCAAAAAAGAAATCAAGAATATGGCTAGGTACTTATCCAACGGCTCAAATGGCAGCTCGAGCTCACGACGTGGCAGCTTTAGC
CATCAAAGGATGTTCGGCTCACCTTAATTTTCCTCATTT
AAGAAGAAAAAAGTTATGAAAAATCAAGAAGAAATAATCAACCTCGAAAATCGTCATGATTTCATTTCTAATGGCTTGAGTTTTCCTTCAAATAT
CGCGACATCACCATCATCATCATCTTCTTCTTCTTCTTTTTCCTCGAATAATGCATTAGTTTCAAAAAAGTGTAAGAGCTCGAAGAAAATTGAAG
AAGAGAAAAAGAAAAAGAAGATGAATAATGATGACGAAGATAAGCACCCAACCTATAGAGGGGTACGTAAGAGGAGTTGGGGCAAATGGGTGTCC
GAAATTCGCGAACCAAAAAAGAAATCAAGAATATGGCTAGGTACTTATCCAACGGCTCAAATGGCAGCTCGAGCTCACGACGTGGCAGCTTTAGC
CATCAAAGGATGTTCGGCTCACCTTAATTTTCCTCATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E277989] | SGN-U571771 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92822 [Download][View] | Facility Assigned ID: TPRAO03TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0168 | Quality Trim Threshold: 14.5 |
Working
