EST details — SGN-C72993

Search information 
Request: 72993Match: SGN-C72993
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72993Clone name: cLER-2-N1
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184275 is on microarray TOM1: SGN-S1-1-8.2.16.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184275 [TUS-44-F17] Trace: SGN-T198276 EST: SGN-E396950 Direction: 3' Facility: INRA
Clone: SGN-C184275 [TUS-44-F17] Trace: SGN-T198277 EST: SGN-E396951 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E278822Length: 472 bp (785 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E278822 [] (trimmed - flagged) AAAATGAACAAGCTAAGCAGTAGTACTCCCATTTTGCTAGCTCTGGTTCTCTGCATTAGCCTAACCTCTGTTACCAACGCGCAACAATGCGGAAG
GCAAAGGGGCGGAGCATTATGTGGTGGCAACTTGTGTTGCAGTCAATTCGGGTGGTGTGGATCGACGCCCGAATATTGTTCACCTAGCCAAGGTT
GCCAGAGCCAATGCAGAGGTGGACCAACTCCAACTCCGACTCCAGGTGGTGGTGCACAAGTTCGAGCAACGTATCATATATATAACCCGCAGAAT
GTTGGGTGGGATTTGAATGCTGTTAGCGCTTACTGTTCAACTTGGGATGCTAATAAGCCTTACTCATGGCGGAGTAAGTATGGCTGGACTGCTTT
TTGTGGTCCTGTTGGACCACGTGGTAGAGACTCCTGCGGAAAGTGCTTAAGGGTGACAAATACACGTACAGGAGCTCAAACAACGGTCAGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T92540 [Download][View] Facility Assigned ID: TPRAG73TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Problems: Possibly chimeric (ends match significantly different genes in arabidopsis)
Sequence Entropy: 0.987 Expected Error Rate: 0.0097 Quality Trim Threshold: 14.5