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EST details — SGN-C72844

Search information 
Request: 72844Match: SGN-C72844
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72844Clone name: cLER-2-G17
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185301 is on microarray TOM1: SGN-S1-1-6.1.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185301 [TUS-47-A11] Trace: SGN-T192290 EST: SGN-E390964 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E278716Length: 505 bp (850 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E278716 [] (trimmed) CGAAAACTAAAAGAAAGTAGAATTTTATCACAGTACGTACATAACACCAAATATGGCGTATTACAATTACAATTTAATCAACAAAATGGTTACAA
TTATTTTTATTCTGGTGCTAGTAATTGTTGATGTGACTATGGTATTCGGCCAAGGGACTCGTGTTGGATTTTATTCCAGTACGTGCCCAAGGGCC
GAATCCATAGTTCAATCAACGGTGAGGTCTCATTTTCAGTCTGATCCAACAGTGGCACCAGGATTGTTGAGAATGCACTTTCATGATTGTTTCGT
ACAAGGTTGTGACGGTTCCATCCTCATTTCTGGTACTGGCACTGAGAGAACAGCTCCTCCGAATTCCAATTTGAGAGGATTCGAGGTTATTGACG
ATGCTAAGCAGCAAATTGAAGCTGTTTGTCCTGGAGTTGTTTCATGTGCTGACATTCTTGCTCTTGCTGCTCGTGATTCCGTTCTCGTGACTAAA
GGATTGACCTGGTCTGTCCCCACGGGACGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E278716] SGN-U577413 Tomato 200607 Build 2 82 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92434 [Download][View] Facility Assigned ID: TPRAE45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0120 Quality Trim Threshold: 14.5