EST details — SGN-C72447
| Search information |
| Request: 72447 | Match: SGN-C72447 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72447 | Clone name: cLER-20-D18 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184212 is on microarray TOM1: SGN-S1-1-7.4.16.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184212 [TUS-44-D2] | Trace: SGN-T198361 | EST: SGN-E397035 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184212 [TUS-44-D2] | Trace: SGN-T198362 | EST: SGN-E397036 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285233 | Length: 688 bp (841 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285233 [] (trimmed)
GGGGGTTGAATTTAAAAATATCCAATTTTTTCGAAGAGAAAAAAAAAGGATAATAAGTGCCTTCTACTCAATTATTTTTACTACTAATAAAGTCC
AAAAGAAATTTTCTTTGTAAGAAGAAAAAAAAATGCTAGAAAGTTCTGTTTTGTTGGAGAATACAGCTGCTGGTGGCGCCGTCACCGGCGCCGAT
GGTGAAGCGTCGGAGCTGAAGAATGAAGGTGGTGGTGGTGGTGGAAGTGTCGGTGGAGGTTCAGAGGAAGAAGATAAGAATTTTTCAGGTGGAAA
TCGTTGGCCACATGAAGAAACTTTGGCTTTACTCAAAATAAGATCGGAAATGGATGTTGCATTTCGTGATTCCAATCTCAAAAGCCCTCTCTGGG
ATGAAATTTCTAGGAAGATGGCTGAGCTTGGGTATAATCGAAATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATTTATAAGTATCATAAGAGA
ACTAAAGATGGTAGATCTGGTAGACAAACTGGGAAAAACTATCGATTTTTCGAGCAATTAGAGCTTTTAGATAGCCAATCCTTGTTTTCATCGCC
TCCATTAAACCATAGCCAAATCAATAGAATGGAAACAATGCCTGTACCAATGCCTATGCCAATGACAATGATAAAACCAGCTGCTAGTGGATGTC
AGGATTTTGGAATGGATCATAGT
AAAAGAAATTTTCTTTGTAAGAAGAAAAAAAAATGCTAGAAAGTTCTGTTTTGTTGGAGAATACAGCTGCTGGTGGCGCCGTCACCGGCGCCGAT
GGTGAAGCGTCGGAGCTGAAGAATGAAGGTGGTGGTGGTGGTGGAAGTGTCGGTGGAGGTTCAGAGGAAGAAGATAAGAATTTTTCAGGTGGAAA
TCGTTGGCCACATGAAGAAACTTTGGCTTTACTCAAAATAAGATCGGAAATGGATGTTGCATTTCGTGATTCCAATCTCAAAAGCCCTCTCTGGG
ATGAAATTTCTAGGAAGATGGCTGAGCTTGGGTATAATCGAAATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATTTATAAGTATCATAAGAGA
ACTAAAGATGGTAGATCTGGTAGACAAACTGGGAAAAACTATCGATTTTTCGAGCAATTAGAGCTTTTAGATAGCCAATCCTTGTTTTCATCGCC
TCCATTAAACCATAGCCAAATCAATAGAATGGAAACAATGCCTGTACCAATGCCTATGCCAATGACAATGATAAAACCAGCTGCTAGTGGATGTC
AGGATTTTGGAATGGATCATAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285233] | SGN-U572185 | Tomato 200607 | Build 2 | 37 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96805 [Download][View] | Facility Assigned ID: TPRDB21TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0069 | Quality Trim Threshold: 14.5 |
Working
