EST details — SGN-C72319

Search information 
Request: 72319Match: SGN-C72319
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72319Clone name: cLER-1-N13
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178649 is on microarray TOM1: SGN-S1-1-2.4.4.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178649 [TUS-29-L7] Trace: SGN-T184072 EST: SGN-E371003 Direction: 3' Facility: INRA
Clone: SGN-C178649 [TUS-29-L7] Trace: SGN-T184073 EST: SGN-E371004 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E280407Length: 446 bp (725 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280407 [] (trimmed) ACACGAATCATGAATAAATATATGTGACAGGGAAGGTAAAGTTTGAACAAATATCAAATTATGAAATCATAATTTCACAAGTACAATGACTTCAA
TACGGAGAATTATAGAAACTGAACTCATCAAGTTTAAATTCCGGATCTGCCTCTGAACCTGCCTCTACCTGCCTCCGAGTCTACTCGAGACCAGT
GCATCTGAAGTCTACTCATCGAACGTACTCATAAATCCACCAAGAAATCCAGCACCATTGCAATCACCACACAATATATCTTTCTTACCTCTGCA
CAGCCAACATAGTCCACCGGCTTTAAACCGTCCGTTGAAATGATCGACGGAGTTAACCCCAGCGCCTTTACATTGTGAGCACGCCACTGCACCAT
TTCTTTGCTGATCCTTTGGTGGATGCTGTTAACAATTTCTCCAGTGCCACAAGGATTCCATCTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280407] SGN-U581204 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91961 [Download][View] Facility Assigned ID: TPRAC79TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5