EST details — SGN-C72302
| Search information |
| Request: 72302 | Match: SGN-C72302 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72302 | Clone name: cLER-1-M18 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178634 is on microarray TOM1: SGN-S1-1-1.3.4.19
See unigene SGN-U578781 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C178634 [TUS-29-K16] | Trace: SGN-T184005 | EST: SGN-E371676 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178634 [TUS-29-K16] | Trace: SGN-T184006 | EST: SGN-E371677 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280375 | Length: 633 bp (824 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280375 [] (trimmed)
GAAGAACAAAAAATCTGTTTAAAGGTATTAATTTCGAAAAAGCAATATGGCATTAGTTTCTGGAGGAAGATCAACGCTGAATCCAAATGCGCCCC
TCTTTGTTCCTTCATTTGTGCGCCAGGTAGAGGATTTTTCACCAGAATGGTGGAACTTGGTGACAACTTCAACATGGTTCCATGACTACTGGATG
AGCCAGAACCAGGGAGAGGAATATGGTGCTGGTAATGATGTTGCTGATTTGCTTCCTGAAAATATTGATCTCAATGTTGATGAGGACATCTTGAA
CATGGAAGCTCAGTTTGAGGAATTTCTTCAATCTTCCGAAAATGAGCAACAAGGAATTAAGTCATCTCTCTATGGTGTCAATGCGATGCCACAAT
ATGGTTTACCATCTGATGCACTGATTAGAACATTGAGTTCACCAAGATCCCCCATTGGTCCACCCAAATACTTTGAGAAGCCATCCAAGATCGTG
AGCCCGAGGAACAGTTTCCGCAGCATCCAGCAGCCTCGTTGAATTCCCAGTCTCTTGGTTTACTTTCAGGAAGTCAGATGTTAGTTTGCAGCAGT
TTAGAAAGTCTTCAAGTTTTAGTTTCATGTAACCTTTGTATAGAGCAAGGTAGGTGTCACTCT
TCTTTGTTCCTTCATTTGTGCGCCAGGTAGAGGATTTTTCACCAGAATGGTGGAACTTGGTGACAACTTCAACATGGTTCCATGACTACTGGATG
AGCCAGAACCAGGGAGAGGAATATGGTGCTGGTAATGATGTTGCTGATTTGCTTCCTGAAAATATTGATCTCAATGTTGATGAGGACATCTTGAA
CATGGAAGCTCAGTTTGAGGAATTTCTTCAATCTTCCGAAAATGAGCAACAAGGAATTAAGTCATCTCTCTATGGTGTCAATGCGATGCCACAAT
ATGGTTTACCATCTGATGCACTGATTAGAACATTGAGTTCACCAAGATCCCCCATTGGTCCACCCAAATACTTTGAGAAGCCATCCAAGATCGTG
AGCCCGAGGAACAGTTTCCGCAGCATCCAGCAGCCTCGTTGAATTCCCAGTCTCTTGGTTTACTTTCAGGAAGTCAGATGTTAGTTTGCAGCAGT
TTAGAAAGTCTTCAAGTTTTAGTTTCATGTAACCTTTGTATAGAGCAAGGTAGGTGTCACTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280375] | SGN-U578781 | Tomato 200607 | Build 2 | 90 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91929 [Download][View] | Facility Assigned ID: TPRAB81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |
Working
