EST details — SGN-C72099
| Search information |
| Request: 72099 | Match: SGN-C72099 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72099 | Clone name: cLER-1-C23 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184987 is on microarray TOM1: SGN-S1-1-8.4.12.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72099 [cLER-1-C23] | Trace: SGN-T91829 | EST: SGN-E280275 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C184987 [TUS-46-D9] | Trace: SGN-T199020 | EST: SGN-E397694 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184987 [TUS-46-D9] | Trace: SGN-T199021 | EST: SGN-E397695 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280274 | Length: 490 bp (869 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280274 [] (trimmed)
CTTGTGCCCCCCTTAATAGTGAAAATTTTCAATTGTTAATTTTCTCGTTAAAAATGCCGATCAACCAAATTACTATTGGAAGCCATGAGGAACTC
CGCCATCCCGGGGCGCTTAAAGCGGCCTTGGCGGAGTTCATCAGTACCCTGATCTTCGTATTCGCAGGTCAGGGTTCTGGTATGGCTTTCAATAA
GCTTACCGATGGCGTCGCTACTCCCGCTGGCCTTATTTCCGCCTCCATAGCACACGCCTTCGGGTTGTTCGTCGCCGTCTCCGTCGGTGCTAACA
TCTCCGGCGGCCACGTCAACCCTGCTGTTACCTTCGGTGCTTTTGTTGGTGGAAACATCACTTTGTTCCGTGGAATTTTGTACATCATTGCACAG
TTGCTTGGATCCACTGCTGCTTGCGCTCTCCTTGAATTCGCCACCGGTGGCATGAGCACGGGATCATTTGCATTGTCAGCCGGTGTATCAGTATG
GAACGCGTTCGTATT
CGCCATCCCGGGGCGCTTAAAGCGGCCTTGGCGGAGTTCATCAGTACCCTGATCTTCGTATTCGCAGGTCAGGGTTCTGGTATGGCTTTCAATAA
GCTTACCGATGGCGTCGCTACTCCCGCTGGCCTTATTTCCGCCTCCATAGCACACGCCTTCGGGTTGTTCGTCGCCGTCTCCGTCGGTGCTAACA
TCTCCGGCGGCCACGTCAACCCTGCTGTTACCTTCGGTGCTTTTGTTGGTGGAAACATCACTTTGTTCCGTGGAATTTTGTACATCATTGCACAG
TTGCTTGGATCCACTGCTGCTTGCGCTCTCCTTGAATTCGCCACCGGTGGCATGAGCACGGGATCATTTGCATTGTCAGCCGGTGTATCAGTATG
GAACGCGTTCGTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280274] | SGN-U581024 | Tomato 200607 | Build 2 | 145 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91828 [Download][View] | Facility Assigned ID: TPRAA24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0139 | Quality Trim Threshold: 14.5 |
Working
