EST details — SGN-C72067

Search information 
Request: 72067Match: SGN-C72067
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C72067Clone name: cLER-1-B11
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178440 is on microarray TOM1: SGN-S1-1-3.3.4.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178440 [TUS-29-C14] Trace: SGN-T183893 EST: SGN-E371564 Direction: 3' Facility: INRA
Clone: SGN-C178440 [TUS-29-C14] Trace: SGN-T183894 EST: SGN-E371565 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280381Length: 498 bp (721 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280381 [] (trimmed) CTTTTCTCCACTTTCAGGGTCCTTAGCCCTTACTATCATTATTTGCTTATCTATACTGAACTAGAAAACCATGGCTATCCGTATGCCTCGTATAA
TCAAGAAGTCTTCTACTGCTGGAGATGTTCCTAAAGGCCACTTTGCTGTTTATGTTGGGGAAAAGCAGAAGAAGAGATTTGTGATCCCTATATCA
TTCTTGAGCCAACCTTTATTTCAAGATTTACTTAACCAAGCAGAGGAAGAATTTGGCTTTAATCATCCGATGGGTGGTGTCACAATTCCCTGCAG
CCAGGATGTGTTCATTGATCTCACTTCTCGCTTGAGTAGGATCTGAGGCTTTTCACCTTACACAATTTTGTAAAAAAACTAACCTTTCTAGTTAG
CACCATGTTACTGATAATTAGATAGAGGGGACTGACTATGTACTCTCAGCTGTAACCTTACATCCTAAATTTGAATGTAATTTTCAGTAGAAAAT
GAAATTTGTTCAGATTCATTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280381] SGN-U563523 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91935 [Download][View] Facility Assigned ID: TPRAC06TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0062 Quality Trim Threshold: 12.5