EST details — SGN-C72047
| Search information |
| Request: 72047 | Match: SGN-C72047 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72047 | Clone name: cLER-1-A11 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178419 is on microarray TOM1: SGN-S1-1-8.2.4.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178419 [TUS-29-B17] | Trace: SGN-T184035 | EST: SGN-E370966 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178419 [TUS-29-B17] | Trace: SGN-T184036 | EST: SGN-E370967 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280463 | Length: 530 bp (822 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280463 [] (trimmed)
GAAGTCGAAACAAGGGGTTTCATTGATTGATAATAGAGAAAAATAAGATCTAACAGTAGTTTTAACTAATTCCATCAAGGATAATCATCACCTTC
TAACAACAGAATTACATACACAGACGATCCAAAAAAAAAAAAAACATTAAGAATCTATGCCTTCTTGGGAGATTTGGTAGCTTTGGATGGAGATT
TAGGGGCCTTTTCACCTCCAGTCTTCTTTGGCAACAAAATTGGGTTGATGTTTGGAAGAACACCACCATGTGCGATTGTTACACCAGCAAGAAGT
TTCCCAAGCTCTTCATCATTCCTCACAGCCAAAAGCAAGTGCCTTGGGATGATTCTGTTCTTCTTGTTGTCACGGGCAGCATTTCCAGCCAACTC
CAACACTTCAGCAGCCAAATATTCAAGTACGGCCGTCAAGTAAACTGGAGCACCCGAACCAACACGTTGAGCGTATCGGCCTTTTTTCAAAAACC
TTCCGATTCTTCCAACGGGGAACTGAAGACCGGCCTTAACAGACCGGGAAACAGG
TAACAACAGAATTACATACACAGACGATCCAAAAAAAAAAAAAACATTAAGAATCTATGCCTTCTTGGGAGATTTGGTAGCTTTGGATGGAGATT
TAGGGGCCTTTTCACCTCCAGTCTTCTTTGGCAACAAAATTGGGTTGATGTTTGGAAGAACACCACCATGTGCGATTGTTACACCAGCAAGAAGT
TTCCCAAGCTCTTCATCATTCCTCACAGCCAAAAGCAAGTGCCTTGGGATGATTCTGTTCTTCTTGTTGTCACGGGCAGCATTTCCAGCCAACTC
CAACACTTCAGCAGCCAAATATTCAAGTACGGCCGTCAAGTAAACTGGAGCACCCGAACCAACACGTTGAGCGTATCGGCCTTTTTTCAAAAACC
TTCCGATTCTTCCAACGGGGAACTGAAGACCGGCCTTAACAGACCGGGAAACAGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280463] | SGN-U581128 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92017 [Download][View] | Facility Assigned ID: TPRAA06TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 12.5 |
Working
