EST details — SGN-C71963
| Search information |
| Request: 71963 | Match: SGN-C71963 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C71963 | Clone name: cLER-19-L21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183229 is on microarray TOM1: SGN-S1-1-6.3.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183229 [TUS-41-K3] | Trace: SGN-T191501 | EST: SGN-E390175 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183229 [TUS-41-K3] | Trace: SGN-T191710 | EST: SGN-E390384 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E284899 | Length: 534 bp (860 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284899 [] (trimmed)
GGTTGTTGGAATCACTGGGTTAATATTGACTAAACTTGATGGTTCTGCTCGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGTATTCCTG
TAAAATTTGTAGGTGTTGGGGAAGGTGTAGATGACCTCCAACCATTCAATGCTGAGGAATTTGTTGATGCTATCTTCCCATGAGGCATGATTCAG
TGACAGTTTCTCCTATATTCTAAGTGAACTCTCTGGTGTTAACAAGACACAAACATTTTGGCGAGAGAGGAGTAATGAGACATTAGAAATTTTTG
TCTTTAACAGAACGTGTGCCTTATGCTCCTTTGTTTATCTAGATCTGCTCTATTTCATTGAGGATGTGTCATCAGAAGAGACACTTAGTTGTCCA
GTACGACTGATGCCATTAGTTGCATCGCCTTTTTTTAAAATCAAAAGATCAGTGTCATCTCCTTGTCATTGTTGCAGTATTAAGTAGTAATACAG
CATTGTAGTTAAAGTGGAGTTTCATTGGACACACAGCTAATACAAGATTGATTTGCATG
TAAAATTTGTAGGTGTTGGGGAAGGTGTAGATGACCTCCAACCATTCAATGCTGAGGAATTTGTTGATGCTATCTTCCCATGAGGCATGATTCAG
TGACAGTTTCTCCTATATTCTAAGTGAACTCTCTGGTGTTAACAAGACACAAACATTTTGGCGAGAGAGGAGTAATGAGACATTAGAAATTTTTG
TCTTTAACAGAACGTGTGCCTTATGCTCCTTTGTTTATCTAGATCTGCTCTATTTCATTGAGGATGTGTCATCAGAAGAGACACTTAGTTGTCCA
GTACGACTGATGCCATTAGTTGCATCGCCTTTTTTTAAAATCAAAAGATCAGTGTCATCTCCTTGTCATTGTTGCAGTATTAAGTAGTAATACAG
CATTGTAGTTAAAGTGGAGTTTCATTGGACACACAGCTAATACAAGATTGATTTGCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E284899] | SGN-U564414 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96471 [Download][View] | Facility Assigned ID: TPRCW71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 12.5 |
Working
