EST details — SGN-C71775

Search information 
Request: 71775Match: SGN-C71775
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C71775Clone name: cLER-19-B16
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185405 is on microarray TOM1: SGN-S1-1-6.1.9.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185405 [TUS-47-E19] Trace: SGN-T192064 EST: SGN-E390738 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E284915Length: 561 bp (712 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E284915 [] (trimmed) TTCTCTCTCTAAAAAAATTGTTATTATATAGTGAGAGAAAAAGAGGATTCAAGAATCATCAAAAGGCAAAAAAAATAATCATGGCTTTATCAAAC
ACCTTATCATTGTCATCATCAAAATCCCTTGATCAATCTCATCTGCTCCATAATCCTACACCCCAACCTCATTTTTCCCTTTTTCCGACCACCCA
ACATGGGCGGCGCCACCCTATCTCCGCCGTACACGCGGCCGAGCCATCCAAGACTGCAGTTAAGCAAGGAAAATGGAGTCTTGATAGCTGGAAAA
CAAAGAAAGCTTTACAACTTCCTGAATACCCAGATGAGAAAGAACTTGAATCGGTGCTTAAAACACTTGAAATGAATCCACCCCTTGTGTTTGCT
GGTGAGGCACGGAGTTTGGAAGAGAAGCTAGCTGAGGCTGCATTGGGGAAAGCTTTTTTGTTACAAAGGGGAGACTGTGCTGAGAGTTTGAAGGA
GTCTAATGCCAATAATATTCGCGATACTTTCAGGATTTTGCTTCACATGAGTGCTGATCTTATGTCTGGTGGACAAGTTCCTGTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E284915] SGN-U581552 Tomato 200607 Build 2 79 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T96487 [Download][View] Facility Assigned ID: TPRCX08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0195 Quality Trim Threshold: 14.5