EST details — SGN-C71623

Search information 
Request: 71623Match: SGN-C71623
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C71623Clone name: cLER-18-I2
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189994 [TUS-59-D24] Trace: SGN-T340345 EST: SGN-E539470 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C189994 [TUS-59-D24] Trace: SGN-T349101 EST: SGN-E548226 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E282498Length: 510 bp (684 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E282498 [] (trimmed) CTTCCCTTTTTTTAAAAAAATAATTACAAAAAATGGTGAATTTTCTTCTGGAAATTTTTATATTTTGCTATGTTGTTGTATTAGTTTCTGGATTT
TCAGAAAATCTCGAAACGTCGTCGTTTAATGAAGGATATTCACAACTTTTTGGTCATGATAATCTTATGGTCATTCAAGATGGAAAATCAGTTCA
TATTTCTCTAGATGAAAGAACAGGAGCTGGATTTGTGTCACAAGACTTGTACCTTCATGGCTTATTCAGTGCTTCTATTAAATTACCAGAAGATT
ACACTGCTGGAGTGGTGGTTGCATTTTATATGTCAAATGGAGACATGTTTGAGAAGAATCATGATGAAATTGACTTTGAGTTTTTGGGAAATATT
AGAGCAAAAAATTGGAGGATTCAAACTAATATTTATGGAAATGGTAGCACACATGTTGGTAGAGAAGAAAGATATGGACTTTGGTCTGATCCAAC
TGAAGATTTTCATACATATACAATTCTTTGGACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E282498] SGN-U575872 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T96294 [Download][View] Facility Assigned ID: TPRCR49TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.920 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5