EST details — SGN-C71409

Search information 
Request: 71409Match: SGN-C71409
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C71409Clone name: cLER-17-M18
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178911 is on microarray TOM1: SGN-S1-1-4.3.3.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178911 [TUS-30-G5] Trace: SGN-T184349 EST: SGN-E371735 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E283165Length: 483 bp (616 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E283165 [] (trimmed) GAGAGAATGATGTTGATATTCATTGAAAGTAGGTGATCAAGATATGCTTGGAGAGTAATATCATGAAAACATATAACTACAAATCAACAAGCAAT
GCCAAAAAATAAAGTTATGGTTTTTGAGGGCATCAAAATTAGTGTCCAAACAAATATGCTATCAGGTTCCAGGTTCTACTTCTTGCTGAGATCAA
TCCCAGCTTTCTTGGCTACAGCATCAAGTCCATTTTTCTCAATGGTCTTTATGGCCTTTGTTGACAACCTCAGTTTCACGAATCGTTTGCCTTCC
TCCCACCAAATTCTCTTGTATTGAAGGTTTACGAATTGCAACTTTTTCGTTTTGTGGTTTGAATGAGAGACCTTGTTTGCCCTGTTGGACTTCTT
GCCAGTGAAGGGGCATACTCTACGAGCAACAGGTTGAAGGGCTGTCTTGAAAGGAACAGAAAGTGAAGCAGGAGAGCTCAAATGGGTGCTTGAAA
TCTTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E283165] SGN-U582646 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T96016 [Download][View] Facility Assigned ID: TPRCN81TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5