EST details — SGN-C71329

Search information 
Request: 71329Match: SGN-C71329
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C71329Clone name: cLER-17-I24
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178891 is on microarray TOM1: SGN-S1-1-8.2.3.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178891 [TUS-30-F9] Trace: SGN-T184756 EST: SGN-E372316 Direction: 3' Facility: INRA
Clone: SGN-C178891 [TUS-30-F9] Trace: SGN-T184757 EST: SGN-E372317 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E282990Length: 430 bp (611 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E282990 [] (trimmed) GTATTCACGGACCGTGTATATGCAGTCCAACATTGGAGACCATATTGATCCAGCAGGTTGGTCAGAATGGAGCGGTGATTTTGCATTGAAAACAT
TGTATTATGGTGAGTACATGAACAGAGGAGCTGGTGCTGGAACTAGTAAGAGAGTGAACTGGCCTGGTTATCATAAAGCCTTGACTAAATCAGAG
GCCGCGAAATTCACTGTGGGTCAGCTGATTCAAGGAGCAGCATGGTTAAAATCTACTGGTGTCGCTTACACTGATGGGTTGTGAGGAACTTGTTT
GATTTAAAATATGTATTGCTAGTGAAGTTTTAGTATGTTTTGGTTGCTTTTTTTTGTATGCTTGTTCTGTGATGATAATAATAATATGCTGCTTT
GTTGTGGTACTGATGACTGAACCAGGCCACAATACGAAGGCATAAATTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E282990] SGN-U585819 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T95841 [Download][View] Facility Assigned ID: TPRCN60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0031 Quality Trim Threshold: 12.5