EST details — SGN-C70467
| Search information |
| Request: 70467 | Match: SGN-C70467 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C70467 | Clone name: cLER-14-P16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185374 is on microarray TOM1: SGN-S1-1-5.4.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185374 [TUS-47-D12] | Trace: SGN-T192467 | EST: SGN-E391141 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185374 [TUS-47-D12] | Trace: SGN-T192656 | EST: SGN-E391330 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E281715 | Length: 615 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E281715 [] (trimmed)
AAAAAAATCCTCATCGGAAAATCATGTCGTGGCAAGTATATGTCGACGATCACCTCCTGTGTGAAATCGAAGGGAACCACCTCAGCGCCGCCGCT
ATCGTCGGCCTTGACGGCGCTGTTTGGGCTAAAAGCTCAACTTTCCCTCAGTTCAAACCCTCAGAGATTGATGCCATCCTGAACGATTTTAATGA
GCCCGGTTCACTTGCACCAACTGGCCTGCATCTTGGTGGCTCAAAGTACATGGTCATTCAAGGGGAACCTGGGGTTGTCATTCGAGGAAAGAAGG
GACCGGGTGGTATTACTATCAAAAAGACTAATCAGGCTCTACTTATTGGTATCTATGATGAACCAATGACTCCAGGCCAGTGTAACTTGGTTGTT
GAGAGGCTCGGTGATTATCTCGTTGAGCAAGGTTATTAATTTGTTGGAATTTCTTTTCAATATGTTTGTATTGAAGATTGTGGTGTTTGCTGATG
ATGGATACTCAAGAGTTGGGAAGTGTTAGATATGATACCTTTCTGGATTCAACAGTTCTCTCTTTGTATTTTGATTTTGCAAGAATTGGTTTAAA
TTATTTTCAAGTGAGACCCTCTGATTATTTTTGAGAGGGGAATTT
ATCGTCGGCCTTGACGGCGCTGTTTGGGCTAAAAGCTCAACTTTCCCTCAGTTCAAACCCTCAGAGATTGATGCCATCCTGAACGATTTTAATGA
GCCCGGTTCACTTGCACCAACTGGCCTGCATCTTGGTGGCTCAAAGTACATGGTCATTCAAGGGGAACCTGGGGTTGTCATTCGAGGAAAGAAGG
GACCGGGTGGTATTACTATCAAAAAGACTAATCAGGCTCTACTTATTGGTATCTATGATGAACCAATGACTCCAGGCCAGTGTAACTTGGTTGTT
GAGAGGCTCGGTGATTATCTCGTTGAGCAAGGTTATTAATTTGTTGGAATTTCTTTTCAATATGTTTGTATTGAAGATTGTGGTGTTTGCTGATG
ATGGATACTCAAGAGTTGGGAAGTGTTAGATATGATACCTTTCTGGATTCAACAGTTCTCTCTTTGTATTTTGATTTTGCAAGAATTGGTTTAAA
TTATTTTCAAGTGAGACCCTCTGATTATTTTTGAGAGGGGAATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E281715] | SGN-U586546 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94974 [Download][View] | Facility Assigned ID: TPRCD92THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0126 | Quality Trim Threshold: 14.5 |
Working
