EST details — SGN-C69754
| Search information |
| Request: 69754 | Match: SGN-C69754 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C69754 | Clone name: cLER-12-H6 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185353 is on microarray TOM1: SGN-S1-1-2.3.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185353 [TUS-47-C15] | Trace: SGN-T192057 | EST: SGN-E390731 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185353 [TUS-47-C15] | Trace: SGN-T192058 | EST: SGN-E390732 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283323 | Length: 620 bp (964 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283323 [] (trimmed)
TTGGAGTTTGACAATTTTCCAGCCATAGTTAAATTTTACACCAACAATAAATATAGCTTCTCATCACGCTAAATAGATGCTCGATGCATACAATT
TATAAGTACTAAAGACCTCATCAGTTTGAGAACAAATGAACAGATTCCATCTTTTCCAGACGGGAAAAAATAGTTGTACGAAAGCATAAAAGAGG
ACAATTTCTGTTTCAACTTCTGGTACATATGCAAATGATATAAACTACTTGATATATTGCGAAACCCACTTAAAGCCATCACCATAACCCATTTT
GCGTACAATACTGCACATAAACACCTCCAAGGGACGAACACTAGAATCAGCTAGATTCACCTTACCCTTGCCAGTAGTGACACCAGTCAACCCAA
GGTGATAACGCAACTCATCTTCTGAGGCAGCATACGGTATGTCTATCTTGTTTCCCAAAATGAGGAAGGGAACAGTCGCTAGGGACTCATCAGAT
AGCAGTGCGTCTAATTCTTTCTTTGACTCAGCGAAGCGCTCTTTGTCATAAGCATCTACCAGGTATACAACAGCATCAACCTTAGCATAGTAATC
CTTCCAAACACGGCGAGCGATCTGATGACCTCCTAAATCAAACGCTTTGA
TATAAGTACTAAAGACCTCATCAGTTTGAGAACAAATGAACAGATTCCATCTTTTCCAGACGGGAAAAAATAGTTGTACGAAAGCATAAAAGAGG
ACAATTTCTGTTTCAACTTCTGGTACATATGCAAATGATATAAACTACTTGATATATTGCGAAACCCACTTAAAGCCATCACCATAACCCATTTT
GCGTACAATACTGCACATAAACACCTCCAAGGGACGAACACTAGAATCAGCTAGATTCACCTTACCCTTGCCAGTAGTGACACCAGTCAACCCAA
GGTGATAACGCAACTCATCTTCTGAGGCAGCATACGGTATGTCTATCTTGTTTCCCAAAATGAGGAAGGGAACAGTCGCTAGGGACTCATCAGAT
AGCAGTGCGTCTAATTCTTTCTTTGACTCAGCGAAGCGCTCTTTGTCATAAGCATCTACCAGGTATACAACAGCATCAACCTTAGCATAGTAATC
CTTCCAAACACGGCGAGCGATCTGATGACCTCCTAAATCAAACGCTTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283323] | SGN-U579915 | Tomato 200607 | Build 2 | 80 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94290 [Download][View] | Facility Assigned ID: TPRBV39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
