EST details — SGN-E693872
| Search information |
| Request: 693872 | Match: SGN-E693872 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C467038 | Clone name: LH_Ea02H06 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C467038 [LH_Ea02H06] | Trace: SGN-T497412 | EST: SGN-E690032 | Direction: 5' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E693872 | Length: 792 bp (1125 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E693872 [] (trimmed)
TTTTTTTTTTTTTTTTTTTTTTTTAACAAAGGGGAAATTAAAATATCCATGAGATAATAGTACATGTGGTATAATATATTATAAGATAAAGAAAC
TCTTATTTGTGTTTGACAAAATAAAAAACTACATATTCCAAATGGGGCATCCAAAATCCCTTATTCATTCCCTTATATTCAAACATCATCATGAC
TAAAACACAAAGCTAGGCCTCAGCAAAGTTCCTCTGGTTGTAGCAATCAAGGTTGTCCCCGGGAGCAACATTCAATATCGTACAATACCTTCTGT
AAAATCCAATCCGATCCTCCACTTGTGGATTCTGTCCTTTGCCACATTCAATTCCACCGTTAATTATGTTTGTAATGACACCGTAGCCTGGTTGT
CTATTTGCTGATGCATCGGCTGCTGATGGCGTCCATTGCCCTGTGATAACATCGTGGCATGATGGCTTATTGCCTTGTGCGGTCATCCAAAACCA
TATTGCTGTTTTAAAAGATACAGTTGCATCTGTAGCTACTAAGTCAGGGTTGTTAACTAAGTCTTGTCCAATTGCTTGCCCAGCTAAGTCATAGT
TAAATTGCCCTGTCAATTGGATAGGTCCTCTGCCATAAAATCCACTTCCCATTTGATTGCCTTCCCTAACAAAACCCTCGTGCCGAATTCGGCAC
GAGGCTTTTTGTTGTTCTTTCTAATATCATTCTTGCTTAGCTTGAAAAGATATGTTTTTGTATTTTGTTCTTCATTTCTTTCCCTCAATTTCCGA
CTTCCTCCATTTCAATGATGGGGACTTTATCT
TCTTATTTGTGTTTGACAAAATAAAAAACTACATATTCCAAATGGGGCATCCAAAATCCCTTATTCATTCCCTTATATTCAAACATCATCATGAC
TAAAACACAAAGCTAGGCCTCAGCAAAGTTCCTCTGGTTGTAGCAATCAAGGTTGTCCCCGGGAGCAACATTCAATATCGTACAATACCTTCTGT
AAAATCCAATCCGATCCTCCACTTGTGGATTCTGTCCTTTGCCACATTCAATTCCACCGTTAATTATGTTTGTAATGACACCGTAGCCTGGTTGT
CTATTTGCTGATGCATCGGCTGCTGATGGCGTCCATTGCCCTGTGATAACATCGTGGCATGATGGCTTATTGCCTTGTGCGGTCATCCAAAACCA
TATTGCTGTTTTAAAAGATACAGTTGCATCTGTAGCTACTAAGTCAGGGTTGTTAACTAAGTCTTGTCCAATTGCTTGCCCAGCTAAGTCATAGT
TAAATTGCCCTGTCAATTGGATAGGTCCTCTGCCATAAAATCCACTTCCCATTTGATTGCCTTCCCTAACAAAACCCTCGTGCCGAATTCGGCAC
GAGGCTTTTTGTTGTTCTTTCTAATATCATTCTTGCTTAGCTTGAAAAGATATGTTTTTGTATTTTGTTCTTCATTTCTTTCCCTCAATTTCCGA
CTTCCTCCATTTCAATGATGGGGACTTTATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E693872] | SGN-U577231 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T493509 [Download][View] | Facility Assigned ID: LH_Ea02H06.r |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 20.5 |
Working
