EST details — SGN-C68352
| Search information |
| Request: 68352 | Match: SGN-C68352 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C68352 | Clone name: cLEN-4-I21 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C184261 is on microarray TOM1: SGN-S1-1-6.2.16.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184261 [TUS-44-F3] | Trace: SGN-T198265 | EST: SGN-E396939 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184261 [TUS-44-F3] | Trace: SGN-T198266 | EST: SGN-E396940 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272161 | Length: 619 bp (937 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E272161 [] (trimmed)
GAAAAAAAAAAGAGTTAGAAAAGATGTGTGGAGGTGCCATAATCTCCGATTATGATCCCGCCGGAAGCTTCTACCGGAAACTTTCTGCTCGTGAC
CTCTGGGCTGAGCTGGACCCTATCTCCGACTACTGGTCCTCTTCTTCCTCATCCTCAACCGTCGGAAAACCTGATTCCGCTCTGTCGCCGGTGAC
TCACTCCGTCGATAAGCCTAATAAATCAGATTCCGGCAAAAAAGGTAATAAGACTGTGAAGGTTGAGAAGGAGAAGAGTAGTGGACCAAGGCCAA
GGAAGAACAAGTACAGAGGAATAAGACAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGCGATCCACAGAAGGGTGTACGCGTTTGGCTTGGT
ACATTCAACACAGCAGAAGATGCTGCTAGAGCCTATGATGAGGCTGCTAAGCGCATTCGTGGTGATAAGGCTAAACTCAACTTTCCAGCCCCATC
ACCACCAGCTAAGCGACAGTGCACTAGCACTGTCGCTGCTGCTGATACACCACCAGCACTACTCCTTGAGAGTTCTGACAACTCTCCTTTGATGA
ACTTTGGATATGATGTCCAGTATCAGAGCCAAACTCCCTACTACCCCAT
CTCTGGGCTGAGCTGGACCCTATCTCCGACTACTGGTCCTCTTCTTCCTCATCCTCAACCGTCGGAAAACCTGATTCCGCTCTGTCGCCGGTGAC
TCACTCCGTCGATAAGCCTAATAAATCAGATTCCGGCAAAAAAGGTAATAAGACTGTGAAGGTTGAGAAGGAGAAGAGTAGTGGACCAAGGCCAA
GGAAGAACAAGTACAGAGGAATAAGACAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGCGATCCACAGAAGGGTGTACGCGTTTGGCTTGGT
ACATTCAACACAGCAGAAGATGCTGCTAGAGCCTATGATGAGGCTGCTAAGCGCATTCGTGGTGATAAGGCTAAACTCAACTTTCCAGCCCCATC
ACCACCAGCTAAGCGACAGTGCACTAGCACTGTCGCTGCTGCTGATACACCACCAGCACTACTCCTTGAGAGTTCTGACAACTCTCCTTTGATGA
ACTTTGGATATGATGTCCAGTATCAGAGCCAAACTCCCTACTACCCCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272161] | SGN-U578439 | Tomato 200607 | Build 2 | 74 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88178 [Download][View] | Facility Assigned ID: TRRAM59TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
